| Id Trinity | TRINITY_DN43428_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_321363 |
| Sequence | AAAAAACACCCGAACTAGCAAACAAACTTAAATAAATAAAAAAACCCTTCCTTTGGTTTCTAGTTTCTTCTTGTTAGTATTTCCAAAGCTTCTTCTGTAC GATTCTGGTGGCATTTATCTACCTCACTCTTTTTTATTTTCTTTGCTCATAAAATCGATAAAACCCAATGTTAGAAACGAGTTATCCGTCGCAAGTGTTT CGTGGTGTTCATTTCATACTCTTCGGATTTAATCCCGTTTCGGAGAGCAATGTTCGATTCAAGCTTGTAAATGGCGGTGGTGTTGATGCAGGGAAGTACG GTGCAAATTGCTCGCATGTTATCGTTGAGAAGATTGCATATGATGATCCAGTCTGTGTTGCTGCGAGAAAAGATGGGAAGACACTCGTCACTGCACTCTG GGTTGATCATAGTGCTGATATTGGAATGCCCGTTGATCCTGCCTCTGTTATGTACAGACCCCTAAAAGATTTAAATGGAATACCTGGTGCGCAAAAATTG ATTATGTGCTTGACTGGTTATCTGCGTCAGGACCGGGATGACATTATGACAATGGTTGGCCTAATGGGTGCGCAATTTTCCAAGCCGTTAGTAGCAAACA AGGTTACCCATCTTATATGCTACAAATTTGAAGGGGAAAAGTATGAACTTGCCAAGAAAATGGGCACAATAAAGCTAGTCAATCATCGTTGGTTAGAAGA TTGCTTGAGGGATTGGGTCCTTCGCCCCGAAGACAAATATAACAAAAGTGGCTATGAATTAGAGGCGGTGGAAGCAGAAGCTAAGGATTCCGAGGAAGAA GCTGAAGATTCCAAGCTGGGGCAATCCGGGGGGAGGAATATGAACAGAAGTCCCCTTAGTTCGAAATTTGGTCATCTAGTGACAAAATCGCCAGGGGAGC CATCAAATACCACTTCAGAACATTCTGGTCGACAGGTTTTGCCAAAAGTTAACAATGGTGAAGGCTCTGTAGTTACCCCACGAAATAAGAACATATCTGA TCGGGACTTAAGCTTTCACTATATTGATAACATGAAGATAAGTGCTCAGGCTCCTGATGTTTCTAGACATGCTACATCATCTCAGATGCCTGACACATAT GTTAAGATCAGTGCATCTAAGAATGCTGAGTTCTCAAATGCAATTTCATCTGGTCTGCTACCTGATCCAAATACCGGAACTTCAGAGTCTAAGAAGTTGG TTTGTGACTTGAAATCCTCGACCGCAAGTGCTGAGGGACTTACACATTCAGATGCTAAGTTTAATTCTACGAGTTATTCTAAAAAGGACCAAAGGAGATT TACTCTTCCAAGGAACTTAGAATGCTCAGGCAATGCAACCGGCCCAGCTGTGTCACCTTTGGATGATTTCAAATTTGGCAACAACCTTGAAACCTCTTCC ACTAAGGTGGAAAATGCAAGTGAGGGAATCAAATATAACCGTATTGAAGGTTCTGGGAAAGGAAATGATTTTATTAAGGGGGGTGAAGCATTTAATTTAT TGCCTCAAAAGAGGATAAAGGAAGCTTCTTCTACTAAATTGAAAACAAGAAAGATGACTACCGATGCAAAATTGTCCAAGGAAAGAACCCCGTTATCAAA TGGCAAATATCGAGCATTAAAAATGGCATCACTGGTTAATGAACCACATGAGGCTGGTGGGTGTGTTTCTGCTGGCATAGATGGTTTAAGTAACTCAAAC ATTTGTTCAATTTCTAAATCTGAAGCTTCTAACTCCAAGTCAATGGCATTTGATGAGCCATTTTCAAGAAATGCAAGCTCAGAGTCTGCTCAATGTGATA ATGCCTGTCAGTATTCAGCACAAGCAGCTATTCAAAGCTTATGTGAGTCTAAAAAAATTATGGGCACACCTGATTTTACAGGTTTGGAAATTAGACAAGT TGATGATGGTCATGAAGCAGAGCAACATAATATCATGAAAAATCTGGGCTGTTCAACACCTGGTAACAAAAAGTCACCAAATGAGGAATTCATTGGTCTT GTTCATTTGGATTTAAGCAATGAAGAAAGTGGCAAGCTGATTAGAAAATCACCCCGCAAGAAGTCAGTTGCCAAGAAAAGTTCGGGTTGTAGACCTAAAG TAGGTGATTCTGCTAAACAGAAAAGATCAGTTCCCTTGAATGAAACTACTGTGCAAGGTGAAGGTGTAAGTTTTTTTAGTGGAAGCGAAGAGATAGCTAC TTGTGATCTGAAGAAGCTTAAGGCGTCCCCCAAAATCCTTAATCTTAATAAAGAAAAAGGGCAAGAGACCATTGGTAAATATGCAGAAGATGCTGGTGGC AAAATAAATTTTTTTGATGATGAAACAGAGGCTCCAGATGACAAATATCAAGATGAGTTGGGAATGTCACTTGATGAAAACAAGTCTGAACTGGTTCATG TTTCTAAAACAGTAAACACAACAAATGTGCAATCAAAAGCAACTCACCATATGGCAGAATATGATGAAACAATGCCTCAAAAGAGTAACAAAACTGAAAC AGAAAAACAGAAGCCACCTTCACTGCTTGACTCAACCTCAGAGTTAAAAGTAAAGCATAGAACGACAAAACGTCCTGCAGTTAGAACTAAAAAGACCACA GTTACCAAGGATGTGTTGAAATCTGCTGAGGCTGTATCTGTGGAGAAGAATCATAATGAGAGGAGACATGAGGCAGAGATGGAAATCCCTGATGAAATGC CCCCCCTGGCTGATATAAGTGATCACTCAACCTCAAAGTTAGTAGTAAAGCATCAAAGGACAAAACGTCCTGCTTGTAGAACCAAAAAGACCACAGTTGC CAAGCATTTTTCAAAATCTGAAGAGGCAGAAGCGGTGGAGAAGAATCATAATGAGAGTAAACATGAGGCAGAGATGGAAATCCCTGGAGAAGTGCCCAGT GAGCGCTCATCCTCAAAGTTAGAAGTAAAGCACCAATTAAAAAAAAGTCCTGCAGGTAGAACTAAGAAGTGCACAGTTGCCAAGAAGAACTCTGAAGAGG CAGTATCTGTGGACAAGATTCATACTGAAAGGGAAAATGAGGCAGAGATGGAACTACTGGAAAAGATACCCCCTCCCGCTGATTTAGCTGAGAGCTCAAC CGCACAAAGAAATAAGTCAGATAATTTTATTGAAGAGGACAAGGAGAATAGACCAATTGATGGAGCAGTAGATGCTGTAAAGAGCAAAAGCATTGGAAGT CGAATTATTAAATCTATTGCAAGGCCAGTAAAAGCTGACTCTACGAAAATGGGTCCTAATTCATCAATATCAGAAGCTAACACAAAAGCAAAAACTGAAG CGGCATGTTTTTTGGTAAGTGGTCATCGGCTACAAAGAAAGGAGTTTCAACAAGTAATCAAGCGTTTAAAAGGAAGGGTTTGCCGGGATTCTCATCAGTG GTCATATCAGGCAACACATTTCATAGTTCCAGACCCTGTACGCAGGACGGAGAAATTTTTTGCTGCTGCTGCATCAGGAAGGTGGATTCTTAAAACTGAT TTCTTAACTGCCAGCACCCAAGCAGGAAAATTGTTGCCAGAGGGGCCTTATGAGTGGCACAAGAGTGGTCTCACTGAGGATGGAGCAATAAATATGGAGG CTCCGAGAAAGTGGCGACTGTTGAGAGAGAGGACAGGTCATGGCGCTTTTCATGGAATGCGCATTATTGTATATGGTGATTGCATTGCCCCACCTTTGGT AGGTGTTCTTTTGAATTTTATTTCATTTAATTCCTTTCCGCCTTCCAATACTGCCATGCTCATCTGAAACGGCATAGATTTTGCAACTGATCAGCCACAG AACCTGTATTTGGTTTTTTAATTTGTCATGTTTTGTTATTTAACTCAATTGTTTTACAGGATACTTTGAAGCGTGTGGTCAAATCTGGAGATGGAACAAT ATTAGCAACTTCTCCTCCTTATACCCGTTTCCTTGACACTGGGGTCGACTATGCCATAGTTAGTCCTGGCATGCCACGTGTTGACGTGTGGGTCCAAGAG TTCTTAAAACATGAGATACCTTGTGTTTTAGCGGACTACTTGGTCGAATATGTCTGCAAACCTGGGTTCTCCCTTGAGAGACATGTACTATATGGCACTC ATACTTGGGCAGAGAGGTCGTATGATAAACTTCAAAGCAAGGCGGAAGAGATTATTGAGGAACTCATTCCTCCTAAAGTTTGTGATGAGGATAACAAGGA AGAAGATGCAATTTGCCAAGTATGTGGATCCGGGGATAGAGGAGATGTAATGCTGATTTGTGGTGATGAAAAGGGTTCTGTTGGTTGTGGAGTTGGTACT CATATTGATTGCTGTGATCCTCCACTCACAGAAGTTCCTGAGGAAGATTGGTTTTGTCCAAAATGCAATGAAACCTCAAAGTGCTCAAATTCTTCCAAGA AAAGGAAAAAGGGTGTCATGTCTTCATCAAAGAGGGAGTGATATGCTCTTCCCTTTGAGTCAGTCATCGTATAGGTAACTCGCCTGAATTTGTAATAATC AGTGGTGACTGAGCACCTTGTACTTAACTGTTCCTAGATAGTTGTCATAATGTGTGATCCTTAGTGATTATCAAACTAATGTAATGTTGATTTGAAAACA TGCTTGCTTAGCATTTTATATGGGACTCAACAGTAAAGACTAAAGAGCAATGTGCCTATTTTTAAACTGTCTGATGTACTGCGTCTAGACAAGCTGTTGA CTTACGGAGTTGTTGACCAAAATTTATTATGCAAAAATTGGTTTACAATCAAGTAGAGGGAAAATTAAAGCACTTCAAATCTAAGAGGGTTTCCCATCTG CAACAGTAAGACTTCTTTTCAAAATTCAAGTCTTGGAGCAACATGTGCTTTGAGGTATGAACTGACAGCGTTGAAATTAAAAGGGATTGAAATAAAAATG GAAGAACAACACACGGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_136037; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_321363
| Blastp | BRCT domain-containing protein At4g02110 from Arabidopsis with 59.66% of identity |
|---|---|
| Blastx | BRCT domain-containing protein At4g02110 from Arabidopsis with 63.27% of identity |
| Eggnog | Topoisomerase (DNA) II binding protein 1(ENOG410XPFH) |
| Kegg | Link to kegg annotations (AT4G02110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428149.1) |
| Pfam | BRCA1 C Terminus (BRCT) domain (PF00533.25) |
| Rfam | - |
| GO | - |