Id Trinity | TRINITY_DN43443_c1_g1_i1 |
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Name Transcript | Ll_transcript_321351 |
Sequence | CTATTCAGCCCAAGGATTACTCTTCGTCTCTTCCGCACCATTGCGAAAACAAAAACAAAATAACGTTAGGGGCACCGACTCAGTGGTGTTTTGTTGTGCA GAGAGAAACAGAAACAGTGAAGGAAGTGTGAAAGGAAAACATCATCAACCATGTTAAGAGCTATGAGTACGAGAAATATGAGGAATATTGTCAATGTTCT TTTACAACGCACGCCAAATCCTCATTTTCACTATTCACCCTTCTTCCATTTTCAAAACCCATCTTCTCTTTCTACACCAAGTTCCTACCTTTACGCCTTC TCCTCCATTTCCCTTCGTCTTTTCACCACCAACTTCTCTCACGACGATTCTTCAGGTGAGAGAAGTGATGAAGGTGCAAGCACAGATGGATGGGAAGAAG AAGACACGGCTGAGCCTAAGATTGGTGATGGGGGTGATGGTGGTGGAGTCGCCTTGCAAAATGTTCCTTGGGGTCAGCGAGCCCATTCTATTGCCAAGGA GGTCCTTACACATTTCACCAAGGACATTGAACTATATGCTTTCAAGACTACTCCTCGTGGATATGTTTATGTGAGATTGGACAAAATAACAAATGAATAT GGGTGTCCAAGCATGGAAGAGCTCGAATGCTACAATCACGAATACAGGAAAAGATTAGATGAAGTTGGAGCACTTGGAGAGATACCTGATGATTTGGGTA TTGAGGTTTCTTCCCCGGGTGCTGAGAGGATACTGAAAGTGCCAGATGATCTTGGTCGATTCAAAGGCATGCCTATGAGAGTATGCTATGCAGAAAATGT AGAGTCCAATTGCCCAGAAGAAGATGGAATTTTCTTGTTAGATTCTATAGATAGAGACTCGGAGATATGCATATGGAAGTTGGCGGATGTTAAAGAGAAC AGAGACCCTCTAAAAAAAGGCAAGCCTTTAAACCGTAAACAGAAGGATTGGAGATTAAAATTGTCATTTAACATGCATAGAATGGTAACTCTGTACCTTG ATTAGTTTTAAAATCTTATCTATTTGATTCAGGAATATTACATTAAACCCTTTTTCTCTCTACCCCTCGTCTATTCAGCCTTGCCTTTTTTTTCCCTCCT CTTTAAGATGATAAGATATGATACGTGGAATTAGTTTTGGAAAAAGATAGTTTTATTTTTCAGTTCAGTACTAGTTGATGTTCTGGTTTTACAATCTTAA ATGAGATTTGAATTGTGAATATAATTAGTTGTTTCTTTGAAGATAGGTTTGTACTTAGAAAAACTTATCCTTGAGGGACTGGGATTATGTGAACTCTGAA ACCCAATAGAGTATCTCACATCTGTGTAATTCTCAAGTATTCCTGTTGGAATTCATAGTTGTGGTATGTTAGGCTTGACTAGGAGTCCTCCCTCTCTTTG CTTCCATGGAAAATTTTAGGAGCCTCATACAGAAGGCTGCCCTGTATATGGTTTTCTTATCTCCGAGTCTCGATAAAAAGTATGCCACAATGAATTATTT CTTTTATTTCTTTTGCTTAATGGAACAGATCTTTAATCATCATGTGTTGATATACCAGCCACAGAGGAGTTTGTTAGTTGTTTCCTTTCCCTTTACATAT TGAACTGTTGTGGCTTGGGTAATGATTGTTGTAATGGTGATAGGTGTAAAGAATGAAACATATTTGAAGTTTTAGTTCATGTTTTTCGTTAGGTGTGTAT TTGCATTGAAACTACTACATTAAATTCAAACTATTTAATGTCCTTACGACAAAACTTGGTTTCATATCTTCAAAATTATGTGGTCTACCAGTTTTGCCTT GTCTGTTTGTTTCGTAGATGCATGTGTTCAGAGGTTGATTTTCAATTTTCATAGCACTTTATCACTTTGTGGGGCAATTATATAACCCTCAAGTTCTCCT ACACACTATGATGACCAAATATTCATTTGTAAACCAATCGTTAAGAAGTAAAGTACAATTTTATGACACATATTACCATCAGAGATGAATTTGTAAGTTG ATTTTGTAGTAGATATATCATTTTTTTATAGAGATTTGAAGCATACCAACATGCTGTAACTTGTGGGTTTGGACCACTATTCTTCT BLAST |
Tissue | pods |
Gene name | LI_gene_136057; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_321351
Blastp | Ribosome maturation factor RimP from Leptospira with 33.1% of identity |
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Blastx | Ribosome maturation factor RimP from Leptospira with 33.1% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (LA_0941) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459462.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |