| Id Trinity | TRINITY_DN43446_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_321422 |
| Sequence | TTTTGTTTTCTCTACCTAATTGGGCACTGTCCCTTTATGTCTTGTTAACTGGATCCACTTTTCCTTGTCCTCAAAGTCTTCCTTCATTCCCCATTCTCAC ACACCACACTAAGCTACAATAATTCATCAATGGCGGATCCTATTCCTTACTCCACCAAAACCCATTCCCCATTTTCAACACTCCAACCAAAACCCATCAA TAAAGCTCCTCACTTTGTTAACCAAACTTTGCTTACCAAGTACTGGGACCTCATTCACCTTATATTCATTGGCATTGCTGTGGCATATGGTCTTTTTAGT AGAAGAAATGTAGAACAAGAGATAATAGAAATTGAAACTGAATCTAGTGTTGTTTGTGGTAATGCTAGTTATGTGTCTAAGATGTTTCCTGATTCGACGA TTTTCGATGAAAATGAATACCCTTGTGGGTTTGATGAGAAGAGGGTTATGCATTGTTTGAATACTCAGTATTTTGATGGGGGTGCTGTTGGTGTTTTTGA TGAACAACTCGAAACCCAATTGTCGATTTCTGAGGATAATCTTAATTATTCTGTTGGATTTGATGGAACCAATGTGGTTCAAGCATGGAATTCAGAGAAC TATGAGAGTGAGCCTGTGGTTGTTGTTGCTCAACCATGTCACACCATTGGTGAATGTGGTGAAGCTGTTAGTTATAAACCTTTAGGACTACCTGTTCGAA GTTTAAGGTTGGTTTCGGAAGGAGTAGGTGGTGTTAAATATAGCAATGAAAGTGTTTCTAGTTCTGGTTCAAAGGGTTCATGTAAGAGCTCAGTTAAGAG TAGAGATAAGCAATTTTGGGACACGGGTCCTTCAATTTTGGAGAGAAAATTTAATGATGGTGATGATACTGCTGGTGCATCGGCTTCTCCAATTCCTTGG CGTTCAAGATCTAGAAAGATGAGAAGGGAGAAAGGATATGGCAATGTTACCCATCCCCATCCTATGCATTTTAGGCCTTATTCAGTTGATGAAACTAAAT TTGGAGCACTCGGTTCGAGGTCCTTACCGTCTGTAACACCTTTCTCTTCCCACGTCGCTGTGTATTCTTCATTAAATTCGACTTCACCAGATAACATGAA CTTCTGCGAGGTGGAAATGGGAAAAGAGGAGGCTTCTTATGTGCCTGCTTCAGAGAAGATGAATTTCCAAGAGGAGGATTTAAGACAAAAGAATACTTCC TTTGTGTCTGGGTCAAAAAATATGAATTTTGAAGAGGAAGATTTTAGAGAAACCAAGACTTCATATGTACCTGCTTCAGAAAGTATAATTTTCCGGGAGG TAGACTTCGGAAAGAAGAAACTCCAAGGGTCTTCTTCAAGAAATGGAAAGATGGCAACTAAAAGGAAACATGCTACTGCTTCCTATCCGTCACATTTCAG GCCAATTTCTGTTGTTGAAACTCAATTTGAATCACTCACTTCTCGGTCTTTCCAGTCAGTGGATTCTCTATCTTTGCATCCGGGTATGTATTCTTCCTTC GATTCAAGTATACCAGATAATGTGAACTACCAAGAGGAAGATATTGAACAAAAGAAGACTTCTCATTTGCATTCTTCAGAAAAAGTGCATCTTCGACAGG AAGATATGGGACAAGAAAGGACTTTCTATGCTCATGCTTCAGAAAATGTGAATTTCCAAGAGGAAAACTTGAGGCAAGGGAAGACTCGTAATGTGCCTGC TTCGGAATATATGAATTTTCAAGAGGAAGATATGGGATTAAAGAAGACTTCCTATGTGCATGCTTCAGAAAATGTGAATTTCCAAGAGGAAAATTCGGGT CAAAGGAAGACCAGCTATGTGCCTGCTTCTGAAAATATGAGTTTCGAAGAGGAAGACATGGGACAGAGGAAGACTTCCTATGTGAATGCTTCAGAAAATA TGATTTTTCAAGAGGAAAATATGGGGCAACAGAAGACTTCATCCGTGCCTGCTTTTGAAAATATGAATTTCCAAGAGGTAGATTTGAGAAAGATTTCTCG GAAACCTTCTTCAAGAAATGGAAGGAGGGAAACTAAAGGAAAGTGTGTTGCTGTTGCTAACCCTTCACATTTTAGGCCAATGTCAGGTGATGAAACTCAA TTTGAAGAGGGAAATGTGAATTTCCAAGATGAAAATTTGGAGCAAAAGAAGACTTGCTATGTACCCGGTTCTGAAAATATGAATTTCCAAGAGGGAGATT TGGGGGAAAAAATTTCTCAGGTGCCTTCTTCTTCGAGAAATGGAAGGATGGAAAATAAAGGAAAATGTGCTGCTGTTTCTCATCCTTCACATATCAGGCC AACGTCAGTTGATGAACCTCAATTTCAATCTATCAGTTCGCACTCTTTCCCGTATATGGGATCTTTCTCATCACGGACGAGCTTAAGTTCCTGTTCTTCG GCGGCAGAAAATATGAACTCGCTGAAGGAAGATTTTGGGGAAAAGAAGAGTTCCCATGGCTCTTCTTCAAGTTCACCATTACCTCCATCTATAAAGAATC ATGATCCCGTATATAGTAATGAATCCTTGCCCCAGGGTGACATTCAGAGTAATCTGAGTGATGATTCGGGGGATTTCAATGAGACTTGGGGTGAGGAAAA TCCACGAGGCAACAAAAAATCGGGGATGCATGCTACACTGTCAGACTCAGAAAAACCCGCAGGCCTTCCAAAAATTCCGTCAAGGGGAAAATCAGTTAGA ACAATAAGAGCTAGTGGACTCTCTTTGGGGAAAATCGGAATAGGAGAAGTATCTAGAAAGCAAAGTGATGAAAAGAAGCCCAATATTGTCGAAGCTGCAT CGGCCAGAAAAGATCAAATGGAAAGTGAAGAACCTGATTTTCTATTGAAAGCAGCCAGTAAGAAAACTCCGGATTCTTATTGTCCTCCTAAACCTGAGGC TACATTTATCAATGGTCGTATCGGAGATAAACTAGAGCCACCGAAGAATGTGTCTGGCGAAGACTCCGATATAGAGCTTGAGAATATTCAATTGAGCTCG GACGAAGATGTATTGTCTGAACATGTGAATGGTTCGGGACTTGATTCTGAGGTGGATAAGAAAGCTAGTGAGTTTATAGCCAAGTTCAAAGCACAGATTA GGCTGCAGAAAATGGGATCGATTGATAGATCGAAAGGGCAAAAGACCATACGAAACTTTGTTAGGTGATTTGTAAGCTGCTGCACTCTAATAGACTTTAA CCAGATGAGTATGAAGTTCATCGAAGATTTTATAACATTATGCTTCTTTGAAATTTCTTCATTTAGAAGATTTGCTTTTTAGAATAACATAATGTAGTAC GTCTTCCACTTATTTATTTCTCGTACAACAAAATTTCTCGGATATTGCTTTTCGGTTCTGCTGTTCCTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_136060; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_321422
| Blastp | - |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434246.1) |
| Pfam | Cotton fibre expressed protein (PF05553.10) |
| Rfam | - |
| GO | - |