Ll_transcript_321576

• Id Trinity: TRINITY_DN43449_c0_g1_i1
• Name Transcript: Ll_transcript_321576
• Sequence: AAAGCTCCCCATACAGCAGAATCGGGCCGAATCTCCATGTTGTTAATGAGTTCGACAGCTTCCTTGAACAACCCTGCCCTGCCCAAGAGACCAACTATGC AAGCATAATGTTGCAAACCTGGAATCAATTCAAACTCCTCTTTCATGATGTAGAAGTATTCTGTTCCTTTACATACAAGTCCCGCATGAGTGCATGCTGC TAAAACTCCCAAGAAGGGATAATTGATGCGATAAAATACCTTTTCAGCATAGTCTAATCTTCCGCACTTAGTATACATATCTATTAGAGCAGTTCCTGTA AAATCTTCCATGATCACTTTGTTCCTCAGGATATAGCAATGCAGTGTCTCCCCAATCCGCAGGTTCCCAAGCTGGCAACACCCGGATAGTAAACTAGCTA TAGTAACGGCATCTGGTTTTTGTCCACACATGTTCATTTTGCAGAACAACTCCATGGCCTCACTTGATTTTCCAGCCTGCACACAGCCAGATATCACAGA ATTCCACGTGATCAGCAATTTCTCGCTCATATCATAAAACAATGACAAAGCAGCTTCTATCTCATCAAATCTAAAATACATGCTTATCAGCCCATTTGCA AGTAAGCAGTTGGTAGCGAGTCCACTCTTCAATCCATAACCATGGAAAGCACATCCAACAGCAAAATGAGCAGGATTAGTGATTCCATGAAGGACACTAA TCAAGAAAACTGCATCCGGTTTTAGGTCTAACTGCAGAGTTTGGATAAAACACTCAGCCGCCGACTCTATATCACCCTTCTCAGAATAGCTAGATATGAT CGCAGTTAAAGAAATCAGGTCTTTCGTGGGAAAATATTTGTAAAGCAATTTTGCCATATCTGTGAATCCTTGCTTTGCATATAGACAAACTAGCGAAGTA ACAACAGAAGCATCATTAATTAAGCCACATTTGATAATATAACAATGGACAGTTGCTGGAATAGCATTCGTTGAAAGAAGGTTCATCATTGTCACTGGAC TGGGTTGGAAACCTTCCCTTAGCATCTCTTTGAAGCACAGAATCGCCTTGTCCGAAAATCCATTTTGGCTATAGGCACCAATCATAGTATTCCAAGAGAC GACATTCTTGTCCGACATTTCACGAAATAAGAATTGGGATGCTTCCAAATGATCACACTTAGCATACATTGAAGCAAGGGCATTATTCAGTTGAGCACAG AAACCAAAGCCAGCTTTGATTCCAAACCCATGAATCGACCTTCCTTGAAGAATAAGCTCATGGCAACCACAACACGGTAGCAAACTAACAATTGTGGTTT GGTTAGGTCTCAAACAGTGTCTAAGCATTTGTACAAAGAGGCGCAGAGCATGATAAGAATGCCCATTTTGTGAATAACCACAAATCAACACGTTCCATGA AACAACATCTCTATGAGGCATATCATCAAACAGTTGGTGTGCTCTATTGGTGAGACCAAGTTTCATGTAAAAATCAACAAGTGAGGTATTTACATAAACA AAATGGTTGATACCCCGTTTAAGCAATTGGGTGTGAATCTGGGATACTTGAAATGGCGAAATGGGTGAAGAGGAAAGGCAAGTTTTGATGAGTAAGGAGA ATGTAAAATGATTGGGGTTGGTATTAGAAGCTAAAAGTTGACGAAAGATGAAAAGTGGGTATCTTGCATTCAGGAATAAAGAGTGAAAGAAAGAGAGATT AGAAGCATTTCTGGTTGTGGATGAGTAAAACGTAGAAGCCACATTCATGTTTCCTAGCTAGTTGCAAATCATTTTTATTAATTACTCCTTTATCTTTTTA TGTAATATGAACTTCAACTTAACTTATATTAGACTTCTTTTTTGTACTATTATTCTTTTGGAATTGTGATTGCTCATTTAGTACTTCATGGTGCATTGAT TCTAAGACTATGGTACTTGTTCT
• Tissue: pods
• Gene name: LI_gene_136064;
• Additional information: -

Expression of Ll_transcript_321576

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.3
• PS2: 0.4
• PS3: 0.5
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_321576

• Blastp: Pentatricopeptide repeat-containing protein At2g04860 from Arabidopsis with 47.06% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g04860 from Arabidopsis with 47.06% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G04860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437960.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;