Ll_transcript_321349

• Id Trinity: TRINITY_DN43458_c0_g1_i2
• Name Transcript: Ll_transcript_321349
• Sequence: CTCAGTACCCTTTATTCTCCCTCCTCTTTCATTTTTATGATGAAATTTGTTCTCTCACTCACTTACCCTAACCATAACCGCCATGCCTTCCGCCTCCGAC TCCGACGCCAATCGCGATCCACCGATCTACTCCGTTCACGACACAGAGCCATTCTTCGATCGTTGTGATGATGATAATGAGAACCGGTACGTAGAGAATA CGGTTCCTTTGGACTATGATATTGACGGCGATGATGCCTTGTTATCAGAAGAAGAAGAAACGGAACCGGTAAACCTCGCCGGTGAAACTCAGCGGCTGGA TGATTTTGATGACAGTGATGGAGATTGTGATACTCAGTTATTCGATGAAGAAAGAGGTGGTGGTGGAACTGAAGTTTTGGAGAATGTTGATTCTGATGAT CCTCATTGTGTTGACACTGCTCAATCACAGGATACTACTGCTGGGAAGAAGAAATTATCGGAGGAGAGTGACGATGTTCGTCATCGAAACACTAATTCAG GTTCGATGCCACCGCGTTATACTTTTCTCCGTGCAGAATCTTTGCGGCGAGCTGCTCTAGCTAGACGAAATATGGCTTTGAAACAGACCCATGTTGAGAC GAATTCTATCATGGATGTGAGTCAGTCATGTCGGGAAACACTGGCTGTAAATGATAATGGGGAACCTGTTCCTACACGTTCTGAGAAATTTTGTGGAGTT GGTCAGGAAAACCATCGCGGGAAAGATAGTGTGGAAGTTGCGGGATCAATGGACAAAAATATGTGCAAGGTTGCTAGCACAGCTGTGAGAAAACTTTTCA TCGATGATTTAACTTTTGAAACTAGTGAAGCTTCTCTTATCTGCAATGATTTAAATGAAGAAGATAGCTTAGACAAGTTGCCTATCTACCATGATGATTT GGCAGGGCTAAGCTATATTGACTCTCAAGAACCTGGAGACCTGTCACAGATAAATGCTCTTGATTTTGTAGACAAGTTTCTCAAAGATAACGCCATGGAC TTGGATCAAGAAATTAGACCTGTTAAAAACGTGGAGGAAAAATCAAAATCCCTCCCCCCTTCAAAAGGGCAACAAAGTTTGGCCAAAAGAGTTAGTGATA GAGGCAAATCTGGAGAAGCTGAGATTTATGACTGGAATGATAGCTGCGAGGATGAAGGCGGGGGAGATATATTCCTCAGGAGAAAGGAAGATTTTTTTGA TGGTAGAACTCATAAGCCAAAGTCTTTGCCAGGACTCCAGAAGATCAAAGTGCGCAGATCAAATGATGATAATGATGAGAAACAATCAAGTTTCCCTAAA AAAAGAAAGATGGCAGTCCACTCTGATTCAAGACTAGGGATGCTTAATCTGAAAGTAAGGGATAATACTGTACAAGAAGGAACAAGAAAATTAAAACGGA ATCTTGCTAATGAATTGGATGAACAATTCAAGACCAATTGCTCTGGAGGAGAGGTGCAACGTAATCCTAAAGCAGGTGTGCAGGAAATGTTGGATGTAGG TATAGATACTCAAATAGCTGCTGAAGCTATGGAAGCCTTATGCAATGCTAATGATATTGTTGCTAATGATGTTGCTCGTGTTACTAGAAGTAGAAAAACT GGTCAACTTAGTAGCTCTATCATCGGGAAAGCTGGGCCAGCTATATCAAAGGAACATTCAAGACAGTATGATAGGAAAAGGAAAGTCAATGACAAATCAG ATCTGCAAACTCCAGGTTTATCAAAGAAAAGTACTAAAATGGTCAGACAGTGCAAACAGGATAATGTGATGACAAGGTCAATGAGGAGTAAGTTAAATGC AGAACGCAACCAAACCTGCAGTGCTAATGAAAACGATAGAATAGTCTCATCTCCAAAAAATGAGCAAAGAAAGTCTGCAGAAACTTTGAAAAGACATCAG CTTGATGAGCTAAATAATCTTGATAGCAACGGCAGTGGAGGGAAGACAATCAACAAAAAGCATTTGCACAGTGAAGTTTGTCATTTTACGCCAATTGCTC GCAGAACTAGACAATCTCGTCCAGTAAATCGATTGATCAAGTCTGATGTAGGATCCAAAAGTTTGGGAGGAGATATAGCAAATGGTTCTCATGAGAAAAG GAGTGGCATTGGCCGCCACTCGTCTAAACCATTGGATACTAAATCTACTCCAGGGTCTTTTGATCACTTTGAAGTAGATGCTAGTACTGAGTTGTGTGAA CTTGAGACATTGGCTCCAAAGGCAAATGCTGTTAGTGTAAACGGTGATGTTGAAATGGGTACAATAGATTTTCCTAAAAGAAGGAGATCCATTAGGATTA GGGAGTTCTCTAGCAATGATAAAGGATCTGAAAAGCTAGTTGGTCCATCTAAAGCAACTGCACAGCCTGAAGATATTGGGCAATCTACTGCTAGCATGAG AAAAATGAGAACAGGTTCTAGAAGTGCCGTCAAATCGCTGGTGAATTGCCGAACTCAATCATCTTTATATGGTGGTTCAGAAATATCTTCTATTGACCAA AGACAAGGAAAAGCATTGAAGCCAAATTTGGATAAAGTAACTGCAGGTGATACACATATTTGTTATAATGTTGCAGATAAAAAGGATGCAAATCTGAATT CAGTTGAAAAGAATAATGCAGATGATTTTTTGTCTACGAATACTTTTGAATTCACAAATTCGAATGAATCTCCAAGAGGGGGGTACAAGTCAGCTGACTT GGCTTCTGCAACTCCTGCTAATTGTAAGACACTGGTGAATGATGCATCACCTGTTTGTATGGGTGATGGTTATTACAAACGATCATGCAATATAAATGTT TCAAATTCATGCCTTCTCAAAGTATTTCGTGAGGATCTAGATAGAGAACTCGTTAGCTTACGTGCCATTAGACCTGAATTAACTACCCCATCTAAACATT CAAGGAAGAGGAGGGATATGACTGATGTTCGAATTCTGTACAGCCAACACTTGGATGAAGATATCGTTAAGCATCAGAAGAAGGTCTTATCGCGGCTAGG AGTTTCTGTAGCATCCTCCATAGCAGATGCAACACACTTCATAGCTGATCAATTTGTGCGTACAAGGAATATGCTCGAAGCTATTGCTTATGGCAAACCG GTGGTCACACACTTATGGATTGAGAGCTGTGGACAGGCTAGCTGTTTTAGTGATGAGAGAAACTACATACTGAGGGACACCAAAAAGGAAAAGGAGATTG GTTTTAGCATGCCAGTGTCGCTAGCACGTGCATCCCAACATCCACTTTTAGAGGGTCGTAAAGTACTGATCACCCCAAATGCTAAACCTAGTAAAGAGAT TATTTCAAGTTTAGTGAAGGCAGTTCAGGGCCAGGCAGTGGAGAGAGTCGGCAGATCTGCATTGAAGGACCATAAATTTCCAGATGATCTACTGATCCTA TCTTGCGAAGAAGATTATTCCTCTTGTGTGCCTTTTCTTGAAAAGGGGGCAATGGTTTGCAGTTCTGAACTATTGTTGAATGGCATAGTTATTCAGAAGT TGGAATATGAAAGGCATAGTCTTTTTGCAGACCAAGTGAAGAAAACACGTTCCACCATATGGTTTAAAAGAGACGAAAAAACATTTATTCCTGTGACTAA ATGTAGTTAAGAGTTGTTTTTTACTCTTTTCCTCTTGATCATTTGTAGTTAGGTCATGGGTGGCGAAGTGCATGAGACTCTCACCTACCAAGGTCTGAGT GTAAATGTATACAGTGTTATCTTGACAAACGAAGAGATCGTTTTTAGGATTTGAATCAAAGATCTTGAAAGTGATATGGATGTATTTCAAATCATTTTCC TCATGTAATATAGTTGTTCTATAGAATAGTTTGAAAGGTGTTTTTGACCCCTTTATGATATTTTGCATTATTATGATTCTTTGACATTAGTGATGTGTGA TACCTGAG
• Tissue: pods
• Gene name: LI_gene_136081;
• Additional information: details;

Expression of Ll_transcript_321349

FPKM

• PAB: 0.1
• PNAB: 4.8
• PS1: 4.7
• PS2: 3.2
• PS3: 4.2
• PW1: 2.2
• PW2: 2.2
• PW3: 2.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_321349

• Blastp: Mediator of DNA damage checkpoint protein 1 from Sus with 29.47% of identity
• Blastx: PAX-interacting protein 1 from Homo with 34.74% of identity
• Eggnog: DNA repair(ENOG4111RPS)
• Kegg: Link to kegg annotations (100144453)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418972.1)
• Pfam: Regulator of Ty1 transposition protein 107 BRCT domain (PF16770.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;