Ll_transcript_395666

• Id Trinity: TRINITY_DN43503_c0_g1_i1
• Name Transcript: Ll_transcript_395666
• Sequence: TGGAAGAGTTAGCGTGAACAAAGAACCTAAATAATTTTAATTAAAAAAAGCATGAAGACTCTGTTTTTCTTATTCTCTACTAGTATCTGCTTCTTCTCAT GACTTTAGCTTTGATCAAAAAGTTTCTTACTTGATCGTTTCCTACGCCATGATTCATTGATTTGTGGTTTCTCCTCCCTTATACATTATAAAGTTTGAAA CTTTCCATCATCATTGTTCAGAATTTAAACATGGGTTCATCGGAGATTGATCAAAACGTTTCTCAATCTCTTTCTTCAAACAATCCCAACCCCATTGACC CTAGAAGTTATCAATTGGAGGTGTTTGAAGTTGCAAAGAAGAGGAATACAATAGCAGTGTTGGATACAGGTTCTGGTAAAACTTTGGTAGCAGTGATGCT CATAAAAGAAGCTTATAAAGCTATCAAGTCTAGTCACATTAAAAAGTTGATTATTTTCTTAGCTCCCACTGTTAATCTTGTCAACCAGCAATTTAAACAT ATAAAAGATCTTACAGGTTTTAAAGTCGAAGAGTACTACGGGGCTAAGGGAGTGGATACATGGGATTTGAAAATCTGGGAGAAGGAGATTAGTGAAAATG ATGTACTGGTTATGACACCCCAGATTCTTTTGGATGCTTTAAGAAAGGCATTCTTAAGTATAGAAATGATATGCTTGATGATTATGGATGAATGTCATAG AGCAACCGGCAAACATCCCTATTCAAAAATAATGGAAGAGTTCTATCACAAAGCTAATGAAAAGCCAAAGATTTTTGGGATGACAGCATCACCAGTAGGT AAAAAAGTCGGTGTTTCCTCTACCAAGGGTTGTGAGGGTCAAATATCAGAACTTGAATACATCTTGGATTCTCGGAGATATACTGTTGAAGATAGGAAAG AAATAGATATACATATCCCTTCTGCAAAAGAGAGTTGTAGATATTATGACCAAGCACAATACCCTGTGTTGAGGTTGAAGTTAAAGATTGAAGCCTTGTT CGAGTCCAATGCATTGTTCTCAGAATTGCGAAGTTTGGCGCAAAGTGAGGATGTGGATTATAAATTTAAGAAACTGCATAATGGGATGTTCAATAAACTT GAAAAAATCTTATATTGCCTTGAAGACCTTGGATCCATATGTGCTTATGAGGCTGCACAAATGTATCACGAAAGTTTCTCCAAAATTATAGGAGGCTGTG AAGTTTACAGAAATGCTTCTCTCAAATGTAAATTTTTTATGGAAAAAGTAATGCAATTAATTGAAGAATCCCTCCATCTCGATGACAAAAAGAATTCGGA GGTTGAATTTGATTATTCAAAGGCAGTAGAGTTGAGACACATATCTCCAAAATTACTTGAACTTATTAAAATCTTCCAGTCACTTGGAGAATCTAGTCAG ATGTCGTGTCTCATTTTTGTTGAAAGAAAACTTACAGCTAAGTTAATGGAAAAATTTGTAAAGAAAGTATCCCATATATCTCATTTCACAGTTTCCTATA TAACCGGAGGCAATACTGCAGTTGATGCGCTGTCTCCTAAGAAGCAGAAGGAGATATTGGATTCTTTCCGCTCTGGAGGGGTCAATCTATTAATTACTAC TGATGTAGCTGAGGAAGGAATTGATGTGCCAAACTGCTCTTGTGTGATACGTTTTGACCTACCCAAGACAGTTCGTAGTTATGTCCAATCTCGGGGAAGA TGTAGGCAGCCTAACTCCCAATTTATTGTGATGTTGGAGAGGGGAAACTTGAAGCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGCTCCATGA CTAATGCAGCTACTAATAAAGACCAGAATGCTTCTAATTTAAGGGTGTTTACTGTAGGGAAAACAAATGCATACCATGTGAATTCTACTGGAGCATCAGT CACTTTAGATTCTAGTGTTGGACTTATAAATCGATACTGTGAAAAGCTACCACATGATAAGTACTCCCGTGTGAAGCCCACTTTTGAGTTTCAGCCTATG GGAGGGGGTTACGCATGTAAGTTAACATTGCCGCCTAATGCAGCTTTCCAAATAATAGTTGGTCCCTCAGGAAAAGATGTTCATTTGGCAAGGCATCTTG TATGTTTAGAAGCTTGTAAGAAGCTGCATCAAATGGGCGCCTTAAATGATCATCTTGTCCCTCTCATTAAAGAAGAGCCTTTAGAAACTGATTGTATTGT GAAAAACAAAGAATCAAGTTCAGGTCCAGGAAGTGGAACCACAAAAAGAAAGGAGTTACATGGCACAACCAGCATTCGTGCGTTATGTGGTACATGGGGA GACAAACTTGATGACACGAAATTTCATGCCTATAAGTTTGATTTCACATGTAATATTGTCAGTGAAATTTACTCCGGGTTTGTTCTTCTGGTTGAGTCAA AGCTTGATGATGATGTGGGAAATATGGAGGTAGATCTTTATTTAATCTCAAAGATGGTGAAGGCTTCTGTCTATTCACGTGGGCAAGTTGACCTGGATGC TGAACAGATGATGAATGCTAAATGCTTCCAAGAGTTTTTTTTCAATGGTTTGTTTGGGAGGTTGGTTCTTCGGTCTAAATCAGCAGCAAGGGGAGGAAGG GAGTTTTTACTTCAAAAAGACACAAATACGTTATGGAACCCAACATACATGTTTTTGCTTCTACCACTTGAGAAACTGAATGATTCATGTATGGGATCAT TGACAATAAATTGGTCTGGAATCAAATCTTGTGCTTCTGCTATTGGGTTTTTAAGGAAGAAGTTTTTGTTGGTTGCTGGAGATTGTTGCAATGATAGTGA TGACACAAAAATCACGTCACCTTGTGATACCAGTCCAATGGAGGTGGAAAGTCAAGATAAAAATAACATTTACTTTGCTAATTGTATGCTTGATGTTAAT AATCTAAAAGACGTGGTAGTTTTGGCCATTCATACTGGCAGAATCTATTGTATTGTTGAATTAGATATCAACCTATCCGCTGAAAGTCCCTTCGATGGCA ACGATGAAAAGTCTGGGGGTGAACAAATAACATTCGCAGATTACTACAAAAAAAGGTATGGCATTACGCTGAGACATCCAGGGCAACATTTGTTACGTTT GAAGCAAAGTCATAATGCACACAATCTTCTTTTGAACTTCCACGAGGAAGATGGTCGGGACAAGGCATCACAAACTGGGCAGGCACAATCAAAGATGCCT GCCCATGTTTACATTCCACCTGAGCTTCTCTATGTTCTTGATGTTAAAAGAGACGTTTTGAGGTCAATGTACTTGCTACCATCACTGATGCATCATCTTC AATCGTTCATGTTATCCAGTCAGCTTAGAGAAGAGATAGGTGGCCAAACTAACAATTTCAACATTCCTAGCGCTCTGATTCTAGAAGCACTTACAACTTT AAGATGTGCTGAAAAATGTTCAATGGAACGTCTTGAGTTACTTGGAGATTCTGTTCTAAAATATGCGGTGAGCTGTCACCTCTTTCTTAAATATCCTAAG AAACATGAAGGACAATTATCTGGCATGCGATCACTGGCTGTCTGTAATTCAACCCTACATAAACGGGCAACAGATCACAAACTGCAGGAGTATATCCGAG ACTCAGCATTTGAGCCACGCCGTTGGGTTGCTCCAGGACAGATATCTATACACCCCGTTTGTTGTGAATGTGGGTTGGAAACACAAGAAGTGCCTTTAGA TGGAAAGTTCCATACTGAAGATCCGAAAGTTGTGGTTGGGAAGTTATGTGACAAGGGTCACCGCTGGATGTGTTCAAAGACCATTGCTGATTGTGCTGAA GCTCTGATAGGAGCATACTATGTGGGTGGTGGATTAATTGCTGCACTTCACGTGATGAAGTGGCTTGGGATTGATGCTGAACTTGAACCTTCTTTGGTTG ATGAAGCCATAACTGCTGCGTCTCTCCATGCATATGTGCCAAAAGTTGAAGAGATTGGAAGCCTTGAAATGAAAATTGGCTATGAATTTTCCATCAAGGG ACTCTTACTGGAGGCAATGACACATGTATCCGGGAAAGAAGTTGGGATTAGCTGCTGTTATGAGAGGCTTGAATTTCTTGGTGACTCAGTACTGGACCTG CTTATCACACGCCATCTTTATCAGAGCCACACAGATATTGATCCAGGAGAATTGACTGACTTGCGTTCAGCTTCTGTCAGTAATGAAAATTTTGCTCAAG TTGCTGTAAGAAGAAACCTTCATCTGCACCTTTTGCATGGCTCAGAATTATTGCTGAGCCAGATCGCAGATTATGTAAAAGTCATTTCTGAATCAGAGAA CAATACTAGATCATTCCAAGGCATTAGAGCTCCCAAGCCACTTGGAGATCTAGTCGAAAGTATTGCTGGGGCTATGCTAATTGATACCAAGCTCAATGTT GACCAAGTGTGGAAAGTTTTCAACCCTTTGCTATCTCCAATTGTTACACCTGATAAACTTGAACTGCCTCCGTGGCGTGAATTAAATGAATTATGTGACT CTCTCCGGTGTTTTGTGAAAGAAAGTTGTGTAAAGAAAGGACCCATGGTGCATGCCACCCTTAGTGTGCAGTTGCATGATACCTTGTTGGTTCGAGAGGG AAAGGGGCAAAATGCAAAAACTGCAAAAGGAGATGCCGCTCTTCATTTGTTAAAGGACCTTGAGAAGAGAGGAATTTCATATAGCAGTAGCGTCTCAAAG AGAAAACGAGATGCTTCTGGTCTTACTGATGAAAACTCCCTGAAGCCAGTTGCACAGTTAGAATATAAAAGGCAGAAAGTGGATGAAACTAACTTAACTG CGAATGCACATACTGGTTTGCTGCCTCTCAAAGACACTTCCATGGAAGCCTCTAACCTTGGTGCTTCTGTTCCAGTTATTGGCTCAATTAATATGAAGAA GGGAGGACCTCGGAGCGCACTATATGAACTGTGCAAGAGACTGCAGTGGCCATTGCCTGAATTTGATTCAACAGAATATAAGGATAGAACTCTATTCCAA GGGTGTGAAGGTCTGGAAGGAAGCAAGGGACAAAACTGTTTCGTGTCGAAAATTAGCTTATGCATACCCAATGGCACCGCTCTAGAATGCGAAGGAGAAG CTAGACCTGATAAGAAGACCTCACATGACTCTGCTGCACTTCAAATGCTTTATGAGCTACAAAGGCTGGGAAGACTTAAGATAACTGATTCACCTACCCT TTCTGTTTCTTCAAAGTAAAAATGATTAGCCTTTGTTTTTACAGGTTTGGATTGAGTACAAAGGAAGGAACATGAATAACTAGTATCATGACTTTGTGGC CACAAAATACACTATGTTTTGTGCCATTGATCTGAACAATTGTCTCAGATCAATGGTACAATATCATAGGTTATATTTGTGGGTGCAAACTTGTGGCACT AGTATTAGTATTACAAAATAAGTATAAAAAATGACCCGAGACAAAAATGGAAAAAAGTTTACTTTAGGTGTTTTAATATAATTCCTCTACAAAGAGGGTT AATTTATAAAACTGCATGTTCAATGTGACTTGACTTTCATGCAATAATATTGCATGTCCTTCCTATTAGTAGCATTTCTTAATGTACACTTTGTTTACTT TGATGAATTTTTTTTATCCTAAACCATAAACCTTGGACACATTGCTTTAAATGAAGGAGGCTGATTCGCTTAGCAAAAAAA
• Tissue: pods
• Gene name: LI_gene_136149;
• Additional information: details;

Expression of Ll_transcript_395666

FPKM

• PAB: 0.5
• PNAB: 4.2
• PS1: 7.7
• PS2: 4
• PS3: 6.7
• PW1: 3.6
• PW2: 2.3
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_395666

• Blastp: Endoribonuclease Dicer homolog 3a from Oryza sativa with 49.14% of identity
• Blastx: Endoribonuclease Dicer homolog 3a from Oryza sativa with 49.08% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (4324864)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435974.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;