| Id Trinity | TRINITY_DN43503_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_395669 |
| Sequence | TGGAAGAGTTAGCGTGAACAAAGAACCTAAATAATTTTAATTAAAAAAAGCATGAAGACTCTGTTTTTCTTATTCTCTACTAGTATCTGCTTCTTCTCAT GACTTTAGCTTTGATCAAAAAGTTTCTTACTTGATCGTTTCCTACGCCATGATTCATTGATTTGTGGTTTCTCCTCCCTTATACATTATAAAGTTTGAAA CTTTCCATCATCATTGTTCAGAATTTAAACATGGGTTCATCGGAGATTGATCAAAACGTTTCTCAATCTCTTTCTTCAAACAATCCCAACCCCATTGACC CTAGAAGTTATCAATTGGAGGTGTTTGAAGTTGCAAAGAAGAGGAATACAATAGCAGTGTTGGATACAGGTTCTGGTAAAACTTTGGTAGCAGTGATGCT CATAAAAGAAGCTTATAAAGCTATCAAGTCTAGTCACATTAAAAAGTTGATTATTTTCTTAGCTCCCACTGTTAATCTTGTCAACCAGGCTTGTTCCCTA AATTTTTCGTTTTTTTCGGCTTTTGATTCCTTTTAGTTTCATTTACATGTCGAATCTAAATGGTGTCTGTGGTTTCATTTTGCAGCAATTTAAACATATA AAAGATCTTACAGGTTTTAAAGTCGAAGAGTACTACGGGGCTAAGGGAGTGGATACATGGGATTTGAAAATCTGGGAGAAGGAGATTAGTGAAAATGATG TACTGGTTATGACACCCCAGATTCTTTTGGATGCTTTAAGAAAGGCATTCTTAAGTATAGAAATGATATGCTTGATGATTATGGATGAATGTCATAGAGC AACCGGCAAACATCCCTATTCAAAAATAATGGAAGAGTTCTATCACAAAGCTAATGAAAAGCCAAAGATTTTTGGGATGACAGCATCACCAGTAGGTAAA AAAGTCGGTGTTTCCTCTACCAAGGGTTGTGAGGGTCAAATATCAGAACTTGAATACATCTTGGATTCTCGGAGATATACTGTTGAAGATAGGAAAGAAA TAGATATACATATCCCTTCTGCAAAAGAGAGTTGTAGATATTATGACCAAGCACAATACCCTGTGTTGAGGTTGAAGTTAAAGATTGAAGCCTTGTTCGA GTCCAATGCATTGTTCTCAGAATTGCGAAGTTTGGCGCAAAGTGAGGATGTGGATTATAAATTTAAGAAACTGCATAATGGGATGTTCAATAAACTTGAA AAAATCTTATATTGCCTTGAAGACCTTGGATCCATATGTGCTTATGAGGCTGCACAAATGTATCACGAAAGTTTCTCCAAAATTATAGGAGGCTGTGAAG TTTACAGAAATGCTTCTCTCAAATGTAAATTTTTTATGGAAAAAGTAATGCAATTAATTGAAGAATCCCTCCATCTCGATGACAAAAAGAATTCGGAGGT TGAATTTGATTATTCAAAGGCAGTAGAGTTGAGACACATATCTCCAAAATTACTTGAACTTATTAAAATCTTCCAGTCACTTGGAGAATCTAGTCAGATG TCGTGTCTCATTTTTGTTGAAAGAAAACTTACAGCTAAGTTAATGGAAAAATTTGTAAAGAAAGTATCCCATATATCTCATTTCACAGTTTCCTATATAA CCGGAGGCAATACTGCAGTTGATGCGCTGTCTCCTAAGAAGCAGAAGGAGATATTGGATTCTTTCCGCTCTGGAGGGGTCAATCTATTAATTACTACTGA TGTAGCTGAGGAAGGAATTGATGTGCCAAACTGCTCTTGTGTGATACGTTTTGACCTACCCAAGACAGTTCGTAGTTATGTCCAATCTCGGGGAAGATGT AGGCAGCCTAACTCCCAATTTATTGTGATGTTGGAGAGGGGAAACTTGAAGCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGCTCCATGACTA ATGCAGCTACTAATAAAGACCAGAATGCTTCTAATTTAAGGGTGTTTACTGTAGGGAAAACAAATGCATACCATGTGAATTCTACTGGAGCATCAGTCAC TTTAGATTCTAGTGTTGGACTTATAAATCGATACTGTGAAAAGCTACCACATGATAAGTACTCCCGTGTGAAGCCCACTTTTGAGTTTCAGCCTATGGGA GGGGGTTACGCATGTAAGTTAACATTGCCGCCTAATGCAGCTTTCCAAATAATAGTTGGTCCCTCAGGAAAAGATGTTCATTTGGCAAGGCATCTTGTAT GTTTAGAAGCTTGTAAGAAGCTGCATCAAATGGGCGCCTTAAATGATCATCTTGTCCCTCTCATTAAAGAAGAGCCTTTAGAAACTGATTGTATTGTGAA AAACAAAGAATCAAGTTCAGGTCCAGGAAGTGGAACCACAAAAAGAAAGGAGTTACATGGCACAACCAGCATTCGTGCGTTATGTGGTACATGGGGAGAC AAACTTGATGACACGAAATTTCATGCCTATAAGTTTGATTTCACATGTAATATTGTCAGTGAAATTTACTCCGGGTTTGTTCTTCTGGTTGAGTCAAAGC TTGATGATGATGTGGGAAATATGGAGGTAGATCTTTATTTAATCTCAAAGATGGTGAAGGCTTCTGTCTATTCACGTGGGCAAGTTGACCTGGATGCTGA ACAGATGATGAATGCTAAATGCTTCCAAGAGTTTTTTTTCAATGGTTTGTTTGGGAGGTTGGTTCTTCGGTCTAAATCAGCAGCAAGGGGAGGAAGGGAG TTTTTACTTCAAAAAGACACAAATACGTTATGGAACCCAACATACATGTTTTTGCTTCTACCACTTGAGAAACTGAATGATTCATGTATGGGATCATTGA CAATAAATTGGTCTGGAATCAAATCTTGTGCTTCTGCTATTGGGTTTTTAAGGAAGAAGTTTTTGTTGGTTGCTGGAGATTGTTGCAATGATAGTGATGA CACAAAAATCACGTCACCTTGTGATACCAGTCCAATGGAGGTGGAAAGTCAAGATAAAAATAACATTTACTTTGCTAATTGTATGCTTGATGTTAATAAT CTAAAAGACGTGGTAGTTTTGGCCATTCATACTGGCAGAATCTATTGTATTGTTGAATTAGATATCAACCTATCCGCTGAAAGTCCCTTCGATGGCAACG ATGAAAAGTCTGGGGGTGAACAAATAACATTCGCAGATTACTACAAAAAAAGGTATGGCATTACGCTGAGACATCCAGGGCAACATTTGTTACGTTTGAA GCAAAGTCATAATGCACACAATCTTCTTTTGAACTTCCACGAGGAAGATGGTCGGGACAAGGCATCACAAACTGGGCAGGCACAATCAAAGATGCCTGCC CATGTTTACATTCCACCTGAGCTTCTCTATGTTCTTGATGTTAAAAGAGACGTTTTGAGGTCAATGTACTTGCTACCATCACTGATGCATCATCTTCAAT CGTTCATGTTATCCAGTCAGCTTAGAGAAGAGATAGGTGGCCAAACTAACAATTTCAACATTCCTAGCGCTCTGATTCTAGAAGCACTTACAACTTTAAG ATGTGCTGAAAAATGTTCAATGGAACGTCTTGAGTTACTTGGAGATTCTGTTCTAAAATATGCGGTGAGCTGTCACCTCTTTCTTAAATATCCTAAGAAA CATGAAGGACAATTATCTGGCATGCGATCACTGGCTGTCTGTAATTCAACCCTACATAAACGGGCAACAGATCACAAACTGCAGGAGTATATCCGAGACT CAGCATTTGAGCCACGCCGTTGGGTTGCTCCAGGACAGATATCTATACACCCCGTTTGTTGTGAATGTGGGTTGGAAACACAAGAAGTGCCTTTAGATGG AAAGTTCCATACTGAAGATCCGAAAGTTGTGGTTGGGAAGTTATGTGACAAGGGTCACCGCTGGATGTGTTCAAAGACCATTGCTGATTGTGCTGAAGCT CTGATAGGAGCATACTATGTGGGTGGTGGATTAATTGCTGCACTTCACGTGATGAAGTGGCTTGGGATTGATGCTGAACTTGAACCTTCTTTGGTTGATG AAGCCATAACTGCTGCGTCTCTCCATGCATATGTGCCAAAAGTTGAAGAGATTGGAAGCCTTGAAATGAAAATTGGCTATGAATTTTCCATCAAGGGACT CTTACTGGAGGCAATGACACATGTATCCGGGAAAGAAGTTGGGATTAGCTGCTGTTATGAGAGGCTTGAATTTCTTGGTGACTCAGTACTGGACCTGCTT ATCACACGCCATCTTTATCAGAGCCACACAGATATTGATCCAGGAGAATTGACTGACTTGCGTTCAGCTTCTGTCAGTAATGAAAATTTTGCTCAAGTTG CTGTAAGAAGAAACCTTCATCTGCACCTTTTGCATGGCTCAGAATTATTGCTGAGCCAGATCGCAGATTATGTAAAAGTCATTTCTGAATCAGAGAACAA TACTAGATCATTCCAAGGCATTAGAGCTCCCAAGCCACTTGGAGATCTAGTCGAAAGTATTGCTGGGGCTATGCTAATTGATACCAAGCTCAATGTTGAC CAAGTGTGGAAAGTTTTCAACCCTTTGCTATCTCCAATTGTTACACCTGATAAACTTGAACTGCCTCCGTGGCGTGAATTAAATGAATTATGTGACTCTC TCCGGTGTTTTGTGAAAGAAAGTTGTGTAAAGAAAGGACCCATGGTGCATGCCACCCTTAGTGTGCAGTTGCATGATACCTTGTTGGTTCGAGAGGGAAA GGGGCAAAATGCAAAAACTGCAAAAGGAGATGCCGCTCTTCATTTGTTAAAGGACCTTGAGAAGAGAGGAATTTCATATAGCAGTAGCGTCTCAAAGAGA AAACGAGATGCTTCTGGTCTTACTGATGAAAACTCCCTGAAGCCAGTTGCACAGTTAGAATATAAAAGGCAGAAAGTGGATGAAACTAACTTAACTGCGA ATGCACATACTGGTTTGCTGCCTCTCAAAGACACTTCCATGGAAGCCTCTAACCTTGGTGCTTCTGTTCCAGGTTTTGCACAATCACTTTTGTTCTGAGT TTGATACTGAGCCTTGTCTTCCCAATGACATAATGTTTACTTCTAGGAGAATTTTTCTTATCGCTTTTGCTTCTTCATTTAGTGCGTAGGTCACTCATTC TCTTCACCCCTTACCTTCTACGTCCCTTTCTTTCTCCATCAACGGAAGCATTCATGGTCTCACATGTTCAGTGTTTCGAGATTTTGAGAAGAAAATGACA CGGAAATTGGAGCATACTGAAGTGCTATGGTTATTTACAATCTTGCATGCAATTATTGTATGCCCCGTTTTAGCAATGCATATACTTCTGGCAGGTTTTA AAATTGTCATGAAGAGCTGAAAATATCAGTTCCAGTTCAGTGAGTCATCTGAGTTATTTCAGTGATCACTCTCCTGCTTTAACATCTAAAATCAATAATA AATACTGCTGACAGTGTTGTTAGAAGCTTCTTTGGTTGACATTCAATTCAGATATAATACATCACTATATTCGTTGATTCCTTGCCATTATTTATTCCGG GTCAGGGAGTTAATTTTCAAAACTACCTGTCAATTAACTTCATTGTGGATTCATGTTTATCAGTTATTGGCTCAATTAATATGAAGAAGGGAGGACCTCG GAGCGCACTATATGAACTGTGCAAGAGACTGCAGTGGCCATTGCCTGAATTTGATTCAACAGAATATAAGGATAGAACTCTATTCCAAGGGTGTGAAGGT CTGGAAGGAAGCAAGGGACAAAACTGTTTCGTGTCGAAAATTAGCTTATGCATACCCAATGGCACCGCTCTAGAATGCGAAGGAGAAGCTAGACCTGATA AGAAGACCTCACATGACTCTGCTGCACTTCAAATGCTTTATGAGCTACAAAGGCTGGGAAGACTTAAGATAACTGATTCACCTACCCTTTCTGTTTCTTC AAAGTAAAAATGATTAGCCTTTGTTTTTACAGGTTTGGATTGAGTACAAAGGAAGGAACATGAATAACTAGTATCATGACTTTGTGGCCACAAAATACAC TATGTTTTGTGCCATTGATCTGAACAATTGTCTCAGATCAATGGTACAATATCATAGGTTATATTTGTGGGTGCAAACTTGTGGCACTAGTATTAGTATT ACAAAATAAGTATAAAAAATGACCCGAGACAAAAATGGAAAAAAGTTTACTTTAGGTGTTTTAATATAATTCCTCTACAAAGAGGGTTAATTTATAAAAC TGCATGTTCAATGTGACTTGACTTTCATGCAATAATATTGCATGTCCTTCCTATTAGTAGCATTTCTTAATGTACACTTTGTTTACTTTGATGAATTTTT TTTATCCTAAACCATAAACCTTGGACACATTGCTTTAAATGAAGGAGGCTGATTCGCTTAGCAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_136149; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_395669
| Blastp | Endoribonuclease Dicer homolog 3a from Oryza sativa with 50.42% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 3a from Oryza sativa with 50.42% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4324864) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435974.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |