Ll_transcript_395506

Id TrinityTRINITY_DN43504_c0_g1_i2
Name TranscriptLl_transcript_395506
SequenceCTGCGTCCGTGTAGTGTCTCCCTATATAATTGTACATTGTATGACACAGAATTGAACAAGAGCTATTAGTCACAGAGAGTGTCTCATTACAGATAAGCCC AAGCTTTTTTCTTAAGTTCTTTGTCAAGATGGCATCCGTTCATGCTAATGTGGCATCGATTGTATGCAAGAATGGTAACAATGGTTGTCAATCGAAGTTC CCGAGTACTGCATTCTTGCCTGGATTTGATGTTGTAGGGAGGGTTTCAAGTGCATGGAAGAAGGAACTTACCCCATCTTACATGGCTTTGGGACCTAAAG CTACATTAACATTTGATCCTCTTGCTACCAATTCAGACAAAACCAAACAGAAGAAAAGTACTGTTGACCCTGCTTCTCCTGATTTTCTGCCTCTTCCTTC CTTTGAACAATGCTTTCCAAAGAGCACAAAAGAACACAGGGAAGTTATTCATGAAGAAACTGGCCATTCGCTAAAAGTTCCCTTTCGACGAGTTCACCTG AGTGGAGATGAACCACAGTTTGATACCTATGACACAAGTGGTCCTCAAAATATAAATCCCAGAGTTGGACTCCCGAAATTGCGCAAAGACTGGATTGACA GGCGAGAGAAAATAGGTGCACCAAGATTCACTCAGATGTACTATGCTAAGCAGGGAATCATTACTGAAGAGATGCTTTACTGTGCCACTCGTGAGAAGCT CAGCCCTGAGTTTGTGAGGTCAGAAGTTGCTCGTGGACGGGCTATCATCCCTTCCAACAAGAACCACTTGGAGCTAGAGCCCATGATAGTTGGAAGAAAC TTTTTGGTGAAAGTAAATGCAAACATCGGAAATTCTGCGGTTGCAAGCTCTATAGAAGAAGAAGTTTACAAGGTTCAGTGGGCAACTATGTGGGGAGCTG ATACAGTCATGGATCTCTCAACTGGTCGTCATATCCATGAAACTCGAGAGTGGATCCTACGCAACTCTTCTGTACCAGTTGGGACTGTACCTATTTATCA AGCACTTGAAAAGGTTAATGGGATTGCTGAAAATCTTACCTGGGAGGTCTTCAGGGATACCCTGATCGAACAAGCTGAACAAGGTGTTGATTACTTCACT ATCCATGCAGGAGTTCTTCTGAGATATATTCCATTAACAGCGAAGCGCATGACTGGTATAGTCTCTAGAGGAGGATCTATTCATGCAAAATGGTGCTTAG CTTATCATAAGGAGAACTTTGCTTATGAGCATTGGGATGACATACTTGATATCTGTAATCAGTATGATGTGGCCTTATCGATAGGCGACGGGCTACGACC TGGATCAATTTATGATGCCAATGACACAGCTCAATTTGCGGAGCTCTTGACACAGGGAGAACTGACCAGAAGAGCATGGGAAAAGGATGTACAGGTGATA AATTCATCAAACTTTTTTTATAACACGGTGTTGATAAATTTATGGCAAGATTGCAGTATGGTGATAACATGATCTCTATATATCTATTAAGTGCATTTAT ATTTTCATTCTTGAATCTTGATTGTTTAGCATGAACAGTTTGGAACTTGAATAGGGGTAATTTGTTTGTTTTAGTCACTTGGGTAGGAGTAGACTATTTA TCAACTGCGTGAGACTGTGAGCTGTGTTAATCTCACCATTGCTATGATGATTGGTGCTTAGTTAAATTCCTAGTTGCCTTCATTACAGATTAAACATACT TTTCTATGGTTTGGAAAGAATTTAAAATGCAATGATTCTATTGATTTATATTAAACCATCATGAGCTGATGTGATGTTACAATGAACAATATTATCCGGA GAAAATGAGTTATTTTGTTTACTTGGACTCCTTTTACAGGTGATGAATGAAGGACCTGGACATATCCCAATGCACAAGATTCCTGAAAACATGGAAAAAC AACTAGAATGGTGCAATGAAGCACCATTCTACACTCTTGGTCCTTTAACAACTGATATTGCTCCTGGTTATGATCACATCACCTCTGCAATTGGTGCTGC CAATATTGGGGCACTAGGTACTGCTCTTCTCTGTTATGTGACTCCAAAAGAACACCTTGGATTACCGAACCGGGATGATGTGAAGGCTGGAGTTATAGCT TACAAGATAGCTGCTCATGCTGCTGATTTAGCCAAGTGTCACCCACTTGCTCAAGCCTGGGATGATGCACTAAGCAAGGCGAGATTTGAATTTCGATGGA TGGACCAATTTGCTTTGTCATTGGATCCAATGACAGCCATGTCCTTCCATGATGAAACATTGCCTTCGGAAGGTGCTAAGGTGGCCCATTTCTGCTCTAT GTGTGGCCCTAAATTCTGCTCTATGAAGATAACCGAGGATGTGCGCAAGTATGCAGAAAAGCATGGCTATGGTGATGCTGAAGAAGCCTTAAAACAAGGG ATGGAGGCTATGAGTGCTGAATTTCGAGCTGCCAAGAAAACTATCAGCGGTGAACAGCATGGTGAAGCTGGTGGAGAGATTTACTTGCCAACAACTTACT TAAGCTCCAAAGAGAGGTGAAGTTAAGTGTGCTTTATTTTTACTTATCTAAGATGCATCTTTCTACTTGACATGTGTTATAATGGCAATCTGTGAATGAT GTCTCCATGAATCGGCTCGGTTGGCAGAGCCGTGGGACATAAAGTGTGAACACCTGAGTTCAAACAGCAATAACCCCCTTCCTCTCCCCGTCTAAAACTT TGCCTATAAAAAGTTACTGTTTAGGATACTTAAGCACCTACTAGATGATCTCCATATAATATGGCACATTATTCCATTAACAATGGTCCTCTCTTAACAT GGAGCACAACCACATACAGTAGAATCCTTTGATTTCTTTAAGCTATAAACATATACTAGAAGATGAAGTGATCAGCTACAGACACTATGTCTCATTATTG CATGAAAAAGATTGAAAACCATATTTTATATGCTTTCTGCCTGTCAATACTGAGTTATCTTCCAAAAACATCTCTTGCAGTACCATCTGAGATAACTTGG AGCTAGCTACACAACTGGATTATCTGGATGGTGAATCAATTTCAAGCTAGGGGAGAATACAAATATGAGTTTGCTGGCAACTTTTAAGAACTTTAATCTT TATCAAACTTTTCTGGTGTTCTCCAATTGTCAGGAATAAATTGCTCCAGTTTTATATTTAAGACCTTCTTTATCTATTATTTTGAGGCATTTTATTAACT CCAAATGCACCAGGGGTGCCTCTATCTGCATGAGCTCCTAAGATTAAGTTAGGATGCTAGCAGATTAGGCTGAGACAGTCCCTTTGAACCTGAACAGGGT GATGCCTGCGTAGGGAGTGTGCAATTTTTTTTCTGTATGCTTTTGCAGGGAGTGTGAATTATATACATGGATTGAGCTTGGATTGTTCTTGGGAAGCAGA TTCAGCAAGATGGCAAAAATGTAGCTGCACAAGAAGCTCCTACTACCAGATAATAAAGTAATGCAACATAAATTCTTTTCAAAGAAAAAACAACATAAAG TACACAATCTTACTTACTGATTTATATTATGAAAGATCAAGTTTTCACTAATAAAACTACTCACCATATTAATTTGGCATGTCAAAATATATGAACATAG TATCTATGATTTTTCTTTTGTGCAACAAGATAGATTAATCTATTGGGAAACACAGACATTATCAAAGTAAATTTTGTCACTTTATTAGTTCTAATCCATC CTATCTTGTTTAAGGAAATCTATCAGAGTTATTTTACTGTAAATCTATATTGTGCATTAACTTTCAGCAATAGTGCTGAGATAAAAATAAAAAATCCATT TTTGTTATGACCAAAAAAATCTCATATTTCAATCCAACATAGCTTCATAGATGCATGGGAAACAAAAAGCTAGTCTTTTACCTGGGCCATTATGTATTCT ACTTGAAGTTTTCTTATTAGGAAGTGAGTGAAGATGTTTAGATAAGATTATATAATGTTTTCATTACTTCTCTATATGGATGAAATTTTGCACTCTCTGA AGATTCACAAATTCTCACCACATGAAGGATTGGTTCAATGAAGTTGCTTGGCACAGGTTGTTTTATGTTATTACTAGCTTGTTACAGTACATATCATTAA CTAAACTTTTGTTTTGTATGTCAATAACCACTAGAGTGAAATTGGTGTAAGCAAAATGACTACTACTATCATTCTTGAATAGAAATAAGACTTTGTAAAC AGTCTTCTTTCTTCTGTGGTTCTGTTGAAATTTAATCTGCATAAAGAGTTACTCATTATTGTTGGAGTTACAAATATTTATAAGCCATAAATAAAAATTC CATGCCTAAAACATTACATGCACTGATGACAGTGAGTTCATATTTTCTGAACATTTAGCAAGTGGTTGCCATATTCTGATCATTTTGCAGCAGATGATAT CATGTTATCTTAGTACTATTAACTACCCATGACAAATTTCCTATCAAGGTTGAAACTTGGCCCATATTTAAGGCATTAAATCTTGTCAAGTTTATCATAA TCTTGAACTTGGTTCAATTCTATCCAACTTTTGTAACATTTTCATAAATGAATTAGGGTCTAGTAAACTAACTTATGATACCTCATGATAAAGCTAAATG TATGATATGGTAAGGTCCATTTACAATGAAAACTTCTCACGCTTGTATAGATCAAAATCTAAGTGAATAAACTGAAATATAATGCATGCATTTGAATTAG ATATTTGGTATGTAGACTTTGTTCAATTCTTGGCAAACAAGCCACCAAAACCACCATCCTTCTTCTTTTGAGTCACTACCACAGAGTTCTTGCGGCTAAT GGTGGTTGCCTCCTCCATTATTTTTCTCCACCATCTTCAGGATAAGATTGGTTTATAGCAGTTGATCTTATCCTCTAGAACATAAAAACATAGTGGTGAC TTCAAAGTAGTCGTATAACAAGCGCGTCATAAATGTATGAAGGATACATGTATTTTTTTCCTTAAAAAAAATGGACATGTCTTCAACTTCTCAGTAAAAG GAGTGTGATTTAATCCAGAACAAATAGCATATACAACTGTAATATAAGGGTTTGTTTTGAAGTTGTTTAGGGGAAATAAGAGAAAATAAAGGGCTCGAG BLAST
Tissuepods
Gene nameLI_gene_136150; 
Additional informationdetails; 

Expression of Ll_transcript_395506

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_395506
BlastpPhosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 82.82% of identity
BlastxPhosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 82.82% of identity
Eggnogthiamine diphosphate biosynthetic process(COG0422)
KeggLink to kegg annotations (AT2G29630)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019455701.1)
PfamThiC-associated domain (PF13667.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;