| Id Trinity | TRINITY_DN43545_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_395819 |
| Sequence | CACCGACTCAAATATTCATATAACTTTCTCAACTTTGTGAACTCTTTCTAGTCTTTTAATAATCTCATCTCATATATATAAATTGAACCACTCTTCACTC TCTCCTTCACCACCCAGCTTTTTCTGTTGCTTCAACTTTTAGCTTTTCCTTTTCCTCTACTCTCCAACTTCGATATTAAGATCATACCCATCATCGCAAG TTTTCACTTATTCCCTTATTCCAACCTTAACCAAAACAAAAATAAGTCACTTACTTTGATTCAAACTCTTACATTTAGAAACTCATATGTTCCATTTCCA AATCCCACAACTCTCTTTCTAATCTCACAAACTTTTCAAATCCTGGGTCCCTTCTCTCCTTCCCTTCCTTAAATACAATTTTATAAAAGCTACCCGATTA TGTAAAATTAAACCTTTCCACCTTAAAATCTCCGAAAAAAAACCCAAAAAAAAATTATTTTTTTCTTCTATCGTTTGGAAAATGATGTAGTGTTACACCC TTTTGGTATATCCACTATTCTATCTATCCAAATTATATTTTCCTTTATAAACAAAAAAACAAAAAAAAAAGTTGATGACAGAAGTGGAGACAGCGTCGCC GACGGCGGCATCGGTGCCGGCAACTCCGGAAACGCCGGGAGGGCCACTGTTTACGTCGCTGCGAGTTGACTCACTATCACACGATAATAACTCGTTCTCA ATGGCAAGGTGCAAATGTTTTCCAAATCAGGGGCAAAATTGCTTCACTGATTTCTCAGTTGGTGTTCCAATTCCCAATATCTCTCTCACTCGCAAGATCG GAGCGGAGTTTGTCGGAACATTCATATTGATATTTGCAGCAACAGCTGGGCCCATAGTGAACAACAAGTACCATGGAGCAGAGGGTCTAATGGGTAATGC AGCTACTGCAGGACTAACAGTGATGTTCATCATTCTCTCAATTGGACACATCTCTGGTGCACACCTTAACCCATCACTCACCATTGCATTTGCGACGTTC CGCCATTTCCCTTGGACACATGTTCCTGCATACATCGCAGCACAAGTTTCTGCTTCAATCTGTGCTTGTTTTGCTCTCAAAGGTGTTTATCATCCTTACC TCACTGGTGGAGTCACTGTCCCTTCTGTCACCGTTGGCCAAGCTTTTGCAACTGAGTTTATCATCACTTTTATTCTCATGTTTGTGGTCACTGCTGTCGC TACTGATACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGTGCTACAGTTTTGCTCAACATTCTTATATCAGGGCCAACAAGTGGTGGTTCCATG AATCCGGTGCGCACCTTGGGTCCAGCCGTTGCAGCAGGAAATTACAAACATATCTGGCTCTATTTGGTGGCGCCAACACTCGGTGCTCTTGCTGGTGCAG GTGTTTATACGCTCGTCAAGCTCCATGACTCCAAGGACGAACCCCCACGTCAGGTTAGGAGCTTCCGTCGCTAGTATCAACGACCCTCCTCTTCCTCCGC CTCCACCCCACTTTTCATGTTTCTTTTTTCATGTGTGATATTATACAACCAAATTAAATAAAATGTGGGGGGACTCCGAATGACCGAGCATGTAAAATTA AGTGTGTATGATTTGTTTTGTTGTGTTGTGTTATATGTTGGCAATCTTGTGGATGTAGAATGCTTTTTGTTAAGGGGCAGACTATACCACATTGTGTGAA TTGTAATGTGTGTACGTTAATAATGAATAATTTTGGATAGTTCCTCTAAAGTGATGTATAAGTTGAGCAAGAAAGAGTGTAAATTGTCTTTCATTAGTTA AAGTGCATCTAGGTGGAGATCTTGACTCACTTTATCTTTGACTGATCCATGATAAGTCACACTCTTATTTGCTCACTTTGTACTCAAAGTTCATCTTAGA GGAGCTCTTTTCCAATATGGTTTTCAGTGTAGAACATCACTTATTTTATTTTTTGCAGCATACCCTTTTCAAGCTACAAAAACATAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_136223; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_395819
| Blastp | Probable aquaporin NIP5-1 from Arabidopsis with 74.38% of identity |
|---|---|
| Blastx | Probable aquaporin NIP5-1 from Arabidopsis with 74.38% of identity |
| Eggnog | Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580) |
| Kegg | Link to kegg annotations (AT4G10380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442036.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |