Ll_transcript_395678

• Id Trinity: TRINITY_DN43560_c0_g1_i2
• Name Transcript: Ll_transcript_395678
• Sequence: CGAAAATGCACCAAAGTAGACTTTGATAGCAATTTGAAGTATTAGTTTTACACTTAGAGTTGATTCATTGAGATTGTTCATATAACATTCTCTGAACAAC ATTGAAACACTTTTGAAATATATAATAATTTCACAAATGCGCTTCTCCTATTGCTCCTACTTCCTTAGGAGAAGAAATCTAAGCACTCGTTCACGTTCAT CTTCACCACTCAACAATAATTCCAACTCTGAATCTTCTTCATTCGTTTCTGGATTCGATGCAGATACTACACTCTCCAGCCTCAAGATTAAGCGACCCTC TCTTTCAGATGATTCGTCCAATTTGGTGTTTAAGCAGATTTCTTCTATTTTCTATGGTGGTGCGTTAGCTAAGAGACCTGGTTCTGAAAAAAATGATGGT GAAAAAGAGTTTGAAAGAACACCAAAGATATCATGGTTGTCTAACATATCTCAAAGCAATATATCTCTGCGACGGAAGGAGCCTTCTCGTGAAAAGAAAC AAAAATGCATGTTTGAATTATCACAACGAAGCCGTTTTGACAGGTTGATTGAAATTTGTGCAAAGGTACTAGGAACAGGGGCTACCATTGAGTTGTTTGG TAAAGTAGGACGAGAACCAGGTTTGAAAGGGTACACCACACTTATAGAAATGTGCATAGATAGCGCTAGGGGAACTGAGGACGGCGACATTGCAATAGAA GAAATGGGGAAGGTTTTTCACCTTTTCAAGTCAATGAGGGAACAAGGTTTAGACCTAGCAGAGCAAGCATACCGGCCACTTCTTTTGTATATAATCGACA TGTGTTTGGTTGAAGAGTTTCACTTTTTCTGTAATGTTATTAAAGACGAGAATCCCAATTCACTTGCTAGACTGGGTTACTATGAAATGATGTTGTGGTT AAGAGTCAACAACGAAGAAAAGATACAGGGTCTTTGTGACTATATTTTAGAGAATGATGATGAGGACGCTTCTAATTTGCGAGAAAGTTATTTATTGGCT CTTTGTGAGAGTGAGCGGAAGAAGCAGATTTTGGACCTGTTGGAGATCATAGACATAAAAAAGCTTTCGTCAACAGAATCTGTTTCTAAGATATTTCAGG CATTAGGAAGGCTACTGTTGGAACCTGTTGCAGAGAAGTTCCTTTTGGACTTCAAGACATGTGATCATGACGCAGATAATATTACAAACTTCATTGCTAG TTATACCATTCATATTCCAAATGTATCGGTTGAGGATCTCTTGACAATATTTAAGGATTTGCACCAACGACTGGATGTCTCACCTTCTTCATCATCATAT GAGAAGCTCATTTTGCATAGCTGTGCCTTCAAGGTGCCCACAGCTCTTGATATTGTCGATGAAATGTGTGAAGCGGGCTTGATTTTATCAACTGAGGTGT TACACACCATATTACAAACTTGTGAGGAAACATGTCAATATGATTTGGTCCATCGGGTCTTGTCTACTATACGTCGCTTCAAATTGGAGACAAATGATGA AATATTCAGATGCATGATACACTTGTTCTTGAAAATGAAAGACCATCAAGGTGCATATAAGATGCTTGATTATTTGGAGGAAATAAATTTGAAGCCAACA GCGAGCATGTACAATGTCATCATGGCAGAGTGTTTCCGTGAGAAAAACATACGCGATGGGGTCAGGGTCCTTGAGCACATGCAAAATGCTGATGTAAAAG CCGATTCACAAACTTTCAGCTACCTGATTAGCAACTCTGAAACTGAAGACGATATAGTAAAGTATTATGAAGAACTGAAACAATCCGGAGTTAAAGCTAC AAAGCAAATTTTCATTGCCCTTATAAATGCTTATGCTGCTTGTGGACAGTTGGAGAAAGCTAAACAGGTAGGGTGCAAGCACAAATGCTACTTCCTTGAA CTAGATTTTATAAGTCTGACAAAGGGGTATAGGTGGACTTTGCAAACCATAATATCTGCATGGTTGATATATTGATGAACAATTGCATGGAGATCTGTTC TATCAAAAATGGAAGAAAAAAAATTGTGTATTGATTTATTTCATGTTTCTGCAGTTGCTTGGCTGTAAAGTTTTTTCTAATTACTAACCAAATTGATATT ACACATCTAGGATCATATTCACTTTCAG
• Tissue: pods
• Gene name: LI_gene_136242;
• Additional information: details;

Expression of Ll_transcript_395678

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_395678

• Blastp: Pentatricopeptide repeat-containing protein At4g04790, mitochondrial from Arabidopsis with 44.4% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g04790, mitochondrial from Arabidopsis with 44.4% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G04790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458206.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;