Ll_transcript_395682

• Id Trinity: TRINITY_DN43560_c0_g1_i5
• Name Transcript: Ll_transcript_395682
• Sequence: CGAAAATGCACCAAAGTAGACTTTGATAGCAATTTGAAGTATTAGTTTTACACTTAGAGTTGATTCATTGAGATTGTTCATATAACATTCTCTGAACAAC ATTGAAACACTTTTGAAATATATAATAATTTCACAAATGCGCTTCTCCTATTGCTCCTACTTCCTTAGGAGAAGAAATCTAAGCACTCGTTCACGTTCAT CTTCACCACTCAACAATAATTCCAACTCTGAATCTTCTTCATTCGTTTCTGGATTCGATGCAGATACTACACTCTCCAGCCTCAAGATTAAGCGACCCTC TCTTTCAGATGATTCGTCCAATTTGGTGTTTAAGCAGATTTCTTCTATTTTCTATGGTGGTGCGTTAGCTAAGAGACCTGGTTCTGAAAAAAATGATGGT GAAAAAGAGTTTGAAAGAACACCAAAGATATCATGGTTGTCTAACATATCTCAAAGCAATATATCTCTGCGACGGAAGGAGCCTTCTCGTGAAAAGAAAC AAAAATGCATGTTTGAATTATCACAACGAAGCCGTTTTGACAGGTTGATTGAAATTTGTGCAAAGGTACTAGGAACAGGGGCTACCATTGAGTTGTTTGG TAAAGTAGGACGAGAACCAGGTTTGAAAGGGTACACCACACTTATAGAAATGTGCATAGATAGCGCTAGGGGAACTGAGGACGGCGACATTGCAATAGAA GAAATGGGGAAGGTTTTTCACCTTTTCAAGTCAATGAGGGAACAAGGTTTAGACCTAGCAGAGCAAGCATACCGGCCACTTCTTTTGTATATAATCGACA TGTGTTTGGTTGAAGAGTTTCACTTTTTCTGTAATGTTATTAAAGACGAGAATCCCAATTCACTTGCTAGACTGGGTTACTATGAAATGATGTTGTGGTT AAGAGTCAACAACGAAGAAAAGATACAGGGTCTTTGTGACTATATTTTAGAGAATGATGATGAGGACGCTTCTAATTTGCGAGAAAGTTATTTATTGGCT CTTTGTGAGAGTGAGCGGAAGAAGCAGATTTTGGACCTGTTGGAGATCATAGACATAAAAAAGCTTTCGTCAACAGAATCTGTTTCTAAGATATTTCAGG CATTAGGAAGGCTACTGTTGGAACCTGTTGCAGAGAAGTTCCTTTTGGACTTCAAGACATGTGATCATGACGCAGATAATATTACAAACTTCATTGCTAG TTATACCATTCATATTCCAAATGTATCGGTTGAGGATCTCTTGACAATATTTAAGGATTTGCACCAACGACTGGATGTCTCACCTTCTTCATCATCATAT GAGAAGCTCATTTTGCATAGCTGTGCCTTCAAGGTGCCCACAGCTCTTGATATTGTCGATGAAATGTGTGAAGCGGGCTTGATTTTATCAACTGAGGTGT TACACACCATATTACAAACTTGTGAGGAAACATGTCAATATGATTTGGTCCATCGGGTCTTGTCTACTATACGTCGCTTCAAATTGGAGACAAATGATGA AATATTCAGATGCATGATACACTTGTTCTTGAAAATGAAAGACCATCAAGGTGCATATAAGATGCTTGATTATTTGGAGGAAATAAATTTGAAGCCAACA GCGAGCATGTACAATGTCATCATGGCAGAGTGTTTCCGTGAGAAAAACATACGCGATGGGGTCAGGGTCCTTGAGCACATGCAAAATGCTGATGTAAAAG CCGATTCACAAACTTTCAGCTACCTGATTAGCAACTCTGAAACTGAAGACGATATAGTAAAGTATTATGAAGAACTGAAACAATCCGGAGTTAAAGCTAC AAAGCAAATTTTCATTGCCCTTATAAATGCTTATGCTGCTTGTGGACAGTTGGAGAAAGCTAAACAGGTAGTCTTAGATCCATTGATACCAGTGAAGAGC TTGAACCAAATCAAGAGTATTCTTGTCTCAGTTCTTGCATCACATGGGCAATTGTCTGAGGCTCTCCTTATTTACGAGGAAATCAAGCAAGCTGGACACA CTCTAGAGCCAAAAGATATTATGAATATCATTGAGCGCACTCATTCTGATGGAGAGTTGGATAGGTTGCTTTTGCTACTTGAGGAATTGAATGATACAGA CTATTGGAATGGTGCTTGCTGCAGAATCATCTTGTATTGTATTCTGAACAAGCATTTAAGTTCTGCTGTGGACTTGTGCAAGCTCCTCAAAGATAAGTTC CAAAATGATGAACTAGTTATGGATGTTCTCTTTGATAAGGTATTTTCACCAATCGAGCTCCTCGAGTCAGAGTCCAGACATTTGCACACTAGCCTCGAGT TGCTTTCAGAAATGAAGGATAAGCATGGCCTTTTGTTCACACAGGAATGTTTTGATCTGCTAAGTGCTCGTGCTAACACCACTGATTTACATAATGCTGA ATGAGGCTCCTTAACAAGAGGGATAAGTAAGGTGCTCTTAACCAAGTATGCTACTAATAGGGGCTTATGTACTCACCTCCTTGACTTTCCAGATATACTG TAGTAATGGATTGCCATTCAAACAACAAAAAATGGATTTTGGTACAAAGTTCAATCCAATTTGCACTAATGTTCTCTTTTAGGCCATTGGAGTCAACATT GGATGCAAGAACCTCATAAGAGTCTAACATACTTATTCCTTTTTATATGTAAATATACTATCAGATAATGAAAACTATTTCTAAGTGTAAGTTAGGGATG AAATCCTACTCTCTTATGCATGAGTTCAAAGCTTGAATTGATCTTCATATATTCTCAAAATGTTAAGCTTACCAGAATTAAATACCTGCCTGACTATCTT ATATTGTTATTTTTTTTTTGAAGTATTATTTTTCTTG
• Tissue: pods
• Gene name: LI_gene_136242;
• Additional information: details;

Expression of Ll_transcript_395682

FPKM

• PAB: 0.3
• PNAB: 7.1
• PS1: 8.4
• PS2: 4.5
• PS3: 7.5
• PW1: 5.7
• PW2: 4.1
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_395682

• Blastp: Pentatricopeptide repeat-containing protein At4g04790, mitochondrial from Arabidopsis with 42.46% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g04790, mitochondrial from Arabidopsis with 42.46% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G04790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458206.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;