| Id Trinity | TRINITY_DN43676_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_494734 |
| Sequence | CCGTTAAGGCCCAGTTTTCTTCCTTTAGTCTTTTTTTTCTTTTAGTTATTTTTTGTAGTTGAATCTGTTTTCTCAACTACCTTTTCTTTTTCAGTTTCTA TAAATAGTTTGTATCTTCCTTCTTTTCAATTCATTCAATAGAAAAATATTATTCAACAATTACATTCTTGAGTCATCTGAAGGCCTTTGGTTGCCTCTGC TATGCTTCCACCATCACAGCTCAGAGAAAGAAGCTTGATCACAGGTCAAAGAAGTGTGTGTTTCTTGGGTTAAAAGGTGGAGTAAAAGGGTATGTTGTTC TTGACATTCAAACTCATGAAATATTCATTTGTAGAAATATAATTTTTTATGAACATGTGTTCCCTTTTCATGAGCTTAAGCATGATGACAATGATGATAA TCTGATCATGCCTACTAAGGACACTGACCACTGGACCCCTGATAATACCCTTAATAGACACAACACTCATCTAGGCACCACTTTCGACCCTACATCTAAC ACTAATATTTGGCCTAGCAACCAGAATGCCAATGAGCATCAAGTCACCACACCTGATGCTAACAATGTAGATAACACTGAATCACAAACAAAGGGCCCTA ATGAAATCAACTCCCCTATGAGATCCCTTAGGAATAAACGAAAACCTAGGTACCTGCAGGATTACCATTGTACCTTAAATAGCTCTTCCTGTCATTTAGA ACCATTAACATGCTCACAAGTAAGATATCCCTTATCTAAAAGCATATCTTATGACCAATTATCTAAGAATCATAGACACTTCTCCCTTACCATATCTTCT GCCAATGAACCTGATACTTACCATGAGGCCATCAAGTATGAGTGTTGGCAGAAAGCTATACAAACAGAATTCAGTGCCCTCGACGCCAACCAAACCTGGA TTCTAACCACTCTTCCTAAGGACAGTAAGGCCATAGGTTGTAAATGGGTGTTCAAGCTTAAGTACAAATTTTATGGAACCATAGAATGGCACAAGGCAAG ACTTGTTGCCAAATGTTTTTCCCAAACTGAAGGTGTTGATAACAAGACCTGTTATCAAAATGACCACTATTAGAGTCATTTTAGCTCTAGCTTCAGCTAA CAATTGGCATCTACATCAGCTAGATATTAACACAACTTTCCTCCATGGTGATTTAAAAGAAAATGTATACATAAAAATTCCTCCAGGCCTCACTATCAAT CAACCTGACCTAGTTTGTAAACTTCAAAAATCACTGTATGGACTAAAACAGTCAAGTAGGCAGTGGCATGAGAAGTTGACCAGTGTCTTGCTTCAAACAG GTTACCAAAGATCTTTTGCAGACCACCTTTCTTTATTAAATCTAATTCTTCCACTTTTACTGCAATTCTTGTGTATGTAGATGATCTTGTATTAGCAGGA AATAGTTTGATTGAGATAACTAATGTCAAAGCATTATTGAACACAAAGTTTAGCATACAGAATCTTGGCCAATTAAAGTATTTCCTTGGCATTGAAATAA CAAGATCCAACAAAGGCATCCTATTTTATCAAAGGAAGTATTCTCTTGATTTATTAGAGGAAACTGGAATGCTTACCTCAAAGCCTATTTCTACTCCAAT GGAGTACACCAAACAACTTCTTAGCCATGAGACAGGCACACCTCTTCCAAATCCTACAATTTATAGAAGACTCATGGGTAAGCTTCTATATTTGACTCAC ACTAGACCCGATATAAGTTTTTCTGTTGGGCACTTAAGCGAATTTCTTTCCAAACCAACTGATAAACATTTTGAGGAAGCCAAACACATTTTGAGATACA TAAAGGGATCCATCAGTGTTGGAATTTTCTTCCCTACTGTTTGCAATTTCAAAGTGAAGGGATACACAGAATCAGACTAGGCTGCTTGCCCAGATTCATG GAAATTTGTGTCTGGATATTGCTTCTACTTAGGCAACTCTCTGATTTCATGGAAAAGCAAAAAACAACAAGTTGTTGCTCGTTCTTCAGCAGAGGCAGAA TATAGGGCAATGGCTCTAGGTGCTTGTGAAGCCCAATGATTGTTTTACTTGTTGAAGGACTTGCAAATTCCTCATCCTCAGCCTATCTCTCTCTATTGTG ACAATCAATCCGCCATTTACATTGCTTCAAATCCTGTTTTTCATGAACGTACAAAACACATAGAGGTTGATTGTCATTCAGTTAGAGAAAAGTTTCAAGC TGGTCTCTTGCATTTGCTTTCCATCCCATCTGAATCTCAAACTGCAGATATACTTACAAAGGCGCTATCTCCCAAATTGTTCTATCATTTCTTTTTCAAG CTTGGGTTGTTAAATATTGACACCCAAGCTTGTGGGGTGCTGTTAGAAGAAAAAGAAACCATGGTGGACAATCCACCGAAGCTTGCAAAAAAGAAGAAAT AGTTTCCTTTTTTATCTTTCTGTTTTCAAGTTTCCTTTTTTATCTTTATGTTTTCAAGTTAGTTATTTTTCTTTGGCCTTTTTTTTTTTTTTTTTTTAGT CCCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_136416; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_494734
| Blastp | Uncharacterized mitochondrial protein AtMg00820 from Arabidopsis with 44.21% of identity |
|---|---|
| Blastx | Copia protein from Sophophora with 36.53% of identity |
| Eggnog | Retrotransposon protein(COG2801) |
| Kegg | Link to kegg annotations (ArthMp071) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432846.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |