Ll_transcript_494803

• Id Trinity: TRINITY_DN43679_c0_g1_i2
• Name Transcript: Ll_transcript_494803
• Sequence: CTTTAATGTTAGGTTTCAAACTAGTCTCCTCCATAATCAAGAAACACCAAAATTTGGAGAATTGCAAGCACATTCAATCTATCATCATCACTTCTGGTCT CTTTCAAGACACTCTTTTTCTCACCAAGCTTATTCAACTTCAACCTCTTCCTATTTTCTCTCCTTTTCTTTCCTTTCTTTTCAATATCATTTCCCACACT CCTAACAACACTACTCGTTTCTTCAATAAAATCATTGCAACCTTTTCTACTAGCCCCCACCCACAATCAACTCTTCTGTGTTATGCTACTATGCGACAAA ACGGTGTCGTACCAGATCAACATACTTTCCCTTTGCTTCTCAAGATGTTCTCAAAATCCAATCTTCAAGATAGCCCATTTATGGTTTTTGCTCAAATTGT TAGATTTGGGTTGGACACTGATCATTTTGTTAGTAATGCTTTGGTATCAGCTTTTGCGAATTCTGGGTTTATGCTAAGTGCACGCCAAGTGTTCGATCAA AGTTCGTCGAAGGATGTTGTTGGTTGGACTGCTTTAATCAATGGGTATGTTAAAAATGATTATCCCAGTGAGGCGATTAAATGTTTTTTGAATATGAGAT CAACGGGGATGAGGATTGATGGGGTCACCATTGTTAGCGTTCTTCGTGCTGCTGCAATGGTGGGTGATGCTTATTTCGGAAAGTGGGTTCATGGGTTTTA CATTTTAGCAGGGAGAGTGGAATTGGATCCTTATATTTGTAGTGCTCTTGTTGATATGTATTTTAAGTGTGGTCATTGTGACGATGCGGGGGAAGTGTTT GATGAAATGCCTTACAAAAATGTAGTTTCTTGGACTACCCTTATAGCTGGCTATGTGCAATGTAACAAGTTTCAAGATGCACAGCGCGTCTTCTGGGACA TGATGTTAACCAATATTATGCCTAATGAATTTACACTAACAAGTGTTCTTAGTGCATGTGCTCACACTGGGGCGTTGGACCAAGGAAGGTTGGTTCATCA ATACATAGAGCATAATAAGGTAAATCTGAATCCGGCGCTAGGGACGGCATTGGTAGATATGTATGCAAAATGTGGATGCATTGGTGAAGCTGTAAGGGTA TTTGAAAGCTTACCGATCAAGGATGTATACACTTGGACAGCAATGATTAATGGGCTGGCTGTGCACGGAAATGCCTTAGGGGCATTAAATATCTTCTCAT GCATGTTAAGGAACTGTATTCAACCTAATGAGATTACCTTCATTGGTGTTCTTAGTGCATGTTCTCATGGTGGTTTCGTCGAAGAGGGGAAAAAGTTATT TGAATCAATGAGCAATGTGTACCACTTGAAGCCAAACATGGACCATTATGGCTGCATGGTTGATCTACTTGGTCGAGCAGGGCATTTAGAAGATGCAAAG CAAATTATAGATAACATGCCAATGAAGCCTAGCCCTGGTGTATTGGGAGCATTATTTGGTGCATGCATGATCCATAAAGCCTTTGAGATGGGTGAATGTA TAGGGAACTATCTGATAAATTTGCAGCCAGACCACAGTGGTAGATACGCACTTCTGGCAAACTTGTATTCCATGTGCCAAAACTGGGAAGCAGCTGCTCA GGTCAGGAAACTCATGAAAGGAGTGCAAGCTGAAAAAACTCCAGGATATAGCTGGATAGAAGTAAATGGTTTAATTCACGAGTTTAAAGCTTTTGATCAT TCACATAATGAATCATCTGGTGTTTATTCAATATTGGATAACTTAATTTTGCAACTGAATCCAGCCGGTCAAGTTCTGGATTGTGAAGATTTGAACATAC TTGGATCCAACACTGGTCAGGGTTGAGTTTACAGTAATCTAACATTGCAGCTCCTGATTTTTGAAGTTATAATGAATAAATACTATTCTTTGACTAACAT AAGACTGAGTAAGTAGTTTAACCAAGGAAAGGTAGCTTCAATGAATTGAGAAAAGATACAAGCTTGGTCAACAGAACAATGAAAATTGTTCTTTTTCTTC CTTTTTAATTCTTCTCACTTTCATTCATTTCATTTTTATCCCAACCAACATAAAAGTGTTGGTTTTAGTCATCGGTAACATGAGATAGATGTAATAGCAA TGAGTGATCCAAGTCCACAACATTGTCATACTCCTAAACAAAAAAGGACG
• Tissue: pods
• Gene name: LI_gene_136421;
• Additional information: details;

Expression of Ll_transcript_494803

FPKM

• PAB: 0.1
• PNAB: 0.8
• PS1: 0.9
• PS2: 0.6
• PS3: 0.8
• PW1: 0.4
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494803

• Blastp: Pentatricopeptide repeat-containing protein At1g50270 from Arabidopsis with 48.44% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g50270 from Arabidopsis with 48.44% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G50270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465125.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;