Ll_transcript_494900

• Id Trinity: TRINITY_DN43688_c1_g1_i1
• Name Transcript: Ll_transcript_494900
• Sequence: ATTCATTCGTCAATTAATTTGGTTCATTTTTCAAGGACTTGCAGCATGTAATGTTTATCTACCTTTTATTTACTATTAATAACTTAATTGCATACATGTC GATAAAATCTGTCCACGTTTTCTTCTTCTCTTCACCCCTCACCAACATTATATTATTCACTCTCAATCTCTCCCAACTCTAAGTTTCATTAAACTTCATT TTCTGCTAATGTTCTCCACCAACACCAGTTCCCTCTTCTTCCCCGCCACCCCTTCCACCTTCCGCTGCCGTGCCTCCGCCGCTGATCTCTCCCCCTCCTT CCCCCGCTTCTTCCACTCCTTAACTTCCGCCGCCACTACCATCGGCGTCAGGATTGGCCAAGGCCCCGACTCCTCTTACATCGAAACCGGAACGAGGCGT GGAAGTAGCAACGATGGAATGAAACCAAAAGCGAAAGAGAAGAATTGGTCTCGGAATAGAGAGAGTTACTTAGTTGATGATAGTGAACCTCTTCCTCTTC CTATGACACATCCTGATTCCTCTCCCGTTTCCGCTGATGAGATTGATAAGCGTCTTCAATGTGACCCCAAATTTGAGGATTGTAAAGAGGTGGTGTATGA ATGGACTGGGAAGTGCCGTAGTTGTCAAGGATCAGGATATGTAAGCTATTACAGCAAAAGAGGGAAAGAGACTACCTGCAAATGCATTCCTTGCGTGGGA ATTGGATATGTGCAGAAGATAACAGCTCGCAAGGATATTGATGTAATGGAGGATTTGGATAATGGAAAACCACCATGATGACTAAGCCTTTTATTCTCCC TAGTTTTTTCTTCTCCTTTTATTCCCTGTTTCCACCTCGGGAATTTATGCTGTATTCATCTTGATGAGTTATATTCTTCCACAATTGTTACTCAAAATAT TCATGTAAACCACTATTGTTAAGGCTAGAGACTGGAAAAGAGATTTCCCTATAAAGAAAAGTAGGATAGCAGCTTGTATCTTTTGGAAAGAATGTATTCT TCATATAATATGCTAATCTTTTAACAAGCACCCTTTTTTTAATACCTTAGCATTTCCTTTTAGCATCTCTAGTTTCGTGGCCATCCAGAAATTATTGAGG AATAACTGATAGATTAAGATTGGCATGATAAGATTTCACTGACTTTTCAATCTCTAGCTTATATAAAGGACTGTTCTTTTTCAATTTTAAGCCATAACTG ATCAGGAAAATCTACTGCAGTAGAGAATGGCAACTACTACTTTTCTTGATTTCCAATACAACCTCTCAAAGAGAAGATACCTGAGGAAGCCATCGCGCTT GTTCTCCAAACAGAACTCTGTGTTGAGAAACAGTTTTCAGCCCAACGTTGATGAAATGAAACAGGTGTTTGACAAATTTGATTCCAATAAAGATGGGAAA ATTTCACAGCAGGAGTACAAAACTACACTGAAATGTTTAGGCATGGGGAGCATGGTTCATGAAGTGCCAAATATTTTCCGGGTGGTTGATTTGGATGGGG ATGGATTCATTAACTTCAAAGAATTTATGGAGGCTCAAAAGAAGGGTGGTGGGATCAGGACTTTGGATATACAGAGTGCATTTCGGACATTCGATAAGAA TGGCGATGGCAAAATAAGTGCAGAGGAAGTTCAAGGAATGCTAAGGAAGCTGGGAGAAAGGTGCAACCTTGAAGAGTGCAGGCGAATGGTGAGAGCAGTG GATACTAATGGAGATGGCATGGTTGACATGAACGAGTTCATGGCCATGATGACTCGGTCCCTAAAGCCATGTTTGAATGCTTATGCTGATCATGTCTCTT GAGGATGAATTGAGAACCATCTCTACGAAAACCAGTTGGTGTTGTAAAAATGAAATTGTAGGATTTGTGTGTGTACCAAGTAAAATAAAGCTGGGTTTTA AAATAAGTGGTGCAATACAGTCGTATAATTAAAAGGAAAATGGACACAGCTAGGAGGCTAAAACCTCCTCTCTCCCTTTCCTCTTGGTTGTAATGAATAA TACTGTAATAATAACTACTTTCTTGGATTCTAATTGCAACTTTCCTAATTTTTCTTCTTCAAAA
• Tissue: pods
• Gene name: LI_gene_136432;
• Additional information: details;

Expression of Ll_transcript_494900

FPKM

• PAB: 40.8
• PNAB: 9
• PS1: 3.6
• PS2: 4.2
• PS3: 4.9
• PW1: 10.9
• PW2: 20.6
• PW3: 28.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_494900

• Blastp: Calmodulin-like protein 1 from Arabidopsis with 57.92% of identity
• Blastx: Calmodulin-like protein 1 from Arabidopsis with 57.92% of identity
• Eggnog: Calcium-binding protein(COG5126)
• Kegg: Link to kegg annotations (AT2G15680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424377.1)
• Pfam: EF-hand domain pair (PF13833.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;