| Id Trinity | TRINITY_DN43692_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_494837 |
| Sequence | ATAAACATGAATGCTTTGAAAGAAAGACTACAGCAGATCAAGCAAGGCCTATTCATGCCAAGAAATCTGAAGGGGAGAGTACCTCTAATGGAGTGAAATT GGGTTCAGATATGAGAGAAGTAGATGTGTCCAGTGGCAGTGATTTCAACAACTTACATTGCAGCTGTGAAGTGTGTGGCAGCCCAAGTACAACTAGATGC ACAAGATGCAAAATAGTCACATACTGCTCAACAAAGTGCTTGATTGAGGACTGGAGATGGCATAAAGTTAACTGCACTGCAGGGGAAGTGAATTCAACTC CAACAGAAAGATTTAATGGAGATGTTGGAGTGCACAAAAATTCACGTAAAGAGGAAGAAAATGTTCATTCATCTGTAGTAGAAGCAACGACAAACTCTAA ATCTCCAATTACAAGATCAAAGAAGGATCCTACCAAGGAAGCCCAGGAACATGGAACTGCAAAGATGGGGCAAAGTGAGGATGAAGCAACAAAGTATGGA AAAGGATTTTATTGCTACAATCAGAGCGTGATGATTGGATTAAGCGGGCTAACTTTGCTAGAGAAAGATTTCACAGCCTCAAGAAAGAGTCTGAACAAAG GTTGTTCGTGTTGAAGAGTGAAAAGGAATCAATATCAAATGCTGAGAAGAAGGCTAGCACTATGGTTCATAATTTACATCAGAGGCTACACAACTTGCAG ATTGCAGTGCAAAAATGCATGTCAGAGAAGAGAAAGCTAGAAGAGCATCTACAAATAGTAGAGAGTGATTGGGCTAAGGCTAAGAATGAACTGCAAAAAG AGAAGAAACACGTTCAATGTTTAACGGTGGAGTGTGACAAGAGTTGTGAGACTGCACACATTGCCAAAATAACAGTTGAAGCGATAAGACAAGAGCTTCA AGAGGAGCGTGAACGTGTCCAACTACTTACAGAGAATGTTAGAATTGCTCAATCTAGAGCTTCTTTTGCTGAGGCAAAACTCCGTGATCTTGATAGAAAA ATCAGATCAAAAGATCATAAGGTTGCTGTCTGGACAGACAGTCTGGGCAAATCTGCTATGGCATGTGCTATATGCCTTACCAACGAAAAGGACTTGGCCT TCGGATGTGGGCACATGACTTGCAGAGAATGTGGATCAAAATTATCGAAGTGTCCTATATGCCGCGAGCAGATCACAACCCATATCAAGCTGTTTCCTGG GTGATGATATTCGGGTGCTTGTGTATTATTTTCAGAGGGTTCCAAATCTATTTTGTACATACAATCCTGGAATAAAGTTTCTCACACCTCACTACTTCTG ATTGTACATGTGCAATTTCAGTTTATTGGTACCTACTTGGTCCTAGTGTTCATACTTGATCCTTTTGTCTTCTTTAGTCTCCGACAGAAGGGAATAGTTC TACTCATCTGGTTATCTGGAACAGATATGTATTCTACATTTCCACTACAATAAGTCTATTTCTAGATAGCCTGTGTGAATTATCTGCCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_136444; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_494837
| Blastp | Ubiquitin carboxyl-terminal hydrolase 17 from Arabidopsis with 38.16% of identity |
|---|---|
| Blastx | Nuclear-pore anchor from Arabidopsis with 32.23% of identity |
| Eggnog | ubiquitin carboxyl-terminal hydrolase(ENOG410XQ92) |
| Kegg | Link to kegg annotations (AT5G65450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449297.1) |
| Pfam | MYND finger (PF01753.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |