| Id Trinity | TRINITY_DN43713_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_278003 |
| Sequence | AAAAAAACTATTGGCGGAATGAGAATTTTTCTTTTATTTACTATTCTCTTATTTTCTTCAATTAATTTTCCAATGCCCTATCTAAACAGATCCTAATCTC TTTTTCTGTGAAAAGCTAAACCAAAAAGTGAAGAAGGGTTAACCCCAAGAGAGAGCAGAGTGCAATGGCTATGATGGATGGCGGCAACAACAACTTAGAG GAGTTAGCGGTAGGGTGCATGCTATCGATCAGGACAACATTGGGTGACGAATTCGAAGGCCAAGTTGTAACCTTTGACCGCCCCTCAAACATCTTGGTAC TCCAAGAAGGTTTCAAACATGGACCTCGTCGAAATATTCGGTTGTTGAAAACTAATTACATCAAAGACTTCACCTTTTTGGGTCAATCGGATGACCCACT TGACCCTAATAACTGCTTCCTCGACCTCACCGCTCTCCAAACTAGAGAAGAACTCGCGATCAGACAAGCAGAGGCAGATGCTGAAAGGATTGGAGTTGGT GTTACCACCGAGGCACAGAGCATCTTTGATGCATTGTCTAAAACGCTTCCAGTCCGCTGGGACAAGACTGTCATAGTTGTGATGAATGAGGTGCGTGTCG GTAGTCCATATAACTCCGAATCTGTTATTGGAGGTACTCCTGCTGCAAATGACCGGGTGAAGAAAATGGTATGATGCTAGCTAGAATTACCTTTCTTTTG CTCTTCTTTTAGTGTTCAATATACTATTGGAGTAACATTGCGTAGAAGTGTCGTATTTTAATTATATAACAAATATCGTATATATTGGTATAACAATGTG TACATTTGTCCACTAGGATTGCTCCTCCTAGGGACCTTATGATGCATTATCACAACAAAACAAAAACTTCCAGTAGAAGCAAAATGAAAAGTCAAGCATG AAAAATATTTTCCTTCTATGTTGGTTGCATTTGATTTTTCGAAAGTGAAGTTCTTTTCTGTAATATTTGACCAATTAATTTGGGATAGTGATGATTGGGG ATTTGGACAGTTTACAGGTAATCGGTTCGAACCTCTATTATGCCTTCTTTTTAGGCAAAACTACTAGATTCCTGCTTAAGTTATTTTGTGTTTTCAAGTT GGTCTTATCAGTTATTTTGTTTCAAATAGGTCCTTTTAAGTTATCTTCTGTTTTCAAGTTAATCCTATAAATTTTTATGTTAGTTTTATAGCTTAAAACT CATTTTTAATGGTACAGTTTCTGAAAAATAATAGAGAAAATTGGTTACATTTATTTTGAACTCAATGACAAATAATGAATTTTGATTGAGTTGAGATAGG ATCAAAAGGAATAAAAAAAGTTACTGAACCAAATTGAAAGCAAGAAATAACTTAGAGAACAAACCTAGCAGTTTTCCCTTAAAAAAGACCCATTAATTTG GGGGACTCTAGCAGTTCAGATCCATATAGATGATTTCTTAACACATTTTAAGTGAAACTCTGCAACCTTTCTTTTATGGTCGATATTTTAGCTTGATAGT CTTTTCAAAATAAAACCTTTCGCCTTGCCAAAACATTTTATCAGCCAGCTCTACTTGGTTTGTTGTTAACTTTTCAAATACCTTCTTGTAGCTTGAATTC GAGAGGAAGAGACTACAAATTCGTGGTACTATTGGTCAATGAAGTTACAAATTTGCATCCTATTGTGGTTCTAAAAGAAACTCCAAAGAAAAGAAACATG ATGATAGGTATGTTGCTTTTATCAAACCCTACACAAAAGGGTTTCCCAAGCCATATTCCTGACTTCAGATATTTTTCGATTATCTGCTGTGTCTTGAACT CCCGAGTTCTGTCTTGCTTATGGAGTTCATTTGAGATAGTTCCTCCGGATTCTTCATAATAGTGTATGCTGAAGCATATGATTTATGTGTTGTTAGACTT GGGGCCCAAGTAAGTGGCTGGATTTATAAAATTTGAGGTTGTGTGATTGGGAAGATTAACCTATTACAATGTGCTAACATGAATTCAAAATGAGTTAAAT TTTTCGTTATATGTTAGAACACTTGCTTTGGATAAATCAACCTATCATTCCTACATGAATGGTTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_136478; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278003
| Blastp | Protein LSM12 homolog from Xenopus with 31.71% of identity |
|---|---|
| Blastx | Protein LSM12 homolog from Xenopus with 31.71% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (444151) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415760.1) |
| Pfam | Anticodon-binding domain (PF09793.8) |
| Rfam | - |
| GO | - |