| Id Trinity | TRINITY_DN43776_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_277705 |
| Sequence | TCAAAATAGACTCATACAAGGCCTACTACACCACTAAAACTTAAACCAACATAACATTAAAAAAGAACAAAATAATTTAGAATATACACCCCTGTTCAGT GTGTAAAACCAGAAAGTCCGTTCATTCTCCTCCTCCTTCTGCGGCATCATCTCAAAACCGAACCACTCCCTGCACCGCCGCGCCCAGCCGTGTAAGGCCA CTCAAATACCCAAATCTGCCAAATTTCGTGGACGGTTCGGAGTTGGCACTTGTTGGTAACAACCATGCCTTCCGCCCCTTCAAAACTCTACGCAGATGAT GTTAGCCTTCTCGTCGTTACGCTTGACACCAATCCCTTCTTCTGGTCCACATTCTCGGTTTCGTTCTCCGATTTCCTCTCTCAGGTGCTTGCGTTTTTGA ACTCAATATTGCTTCTCAGCCAACTTAATCAATTGGTTGTTATTGCCACTGGATGCAATTCATGTGGCTATGTTTACGATTCTGCTTCCAGTAAGAACCA TGCTCCCCCTACGGCTTCAATGCCCGCGCTTTATTCCAATTTGCTGCACAATTTGGAACAATTCGTTGCTAGGGACCAGAAGTTGTCAAAGCCTGATCAT GATACTCAGGGGATTGTTCCGGCTTCGTTGCTATCAGGAGCGTTGTCCATGGCCCTTTGTTGTATCCTACTAATTGATAACTGCTCCATTTTGCATTTTG TTGATTGTATGTCTTTGTTTTTGGTTTGCAAGTTATTTGAATTCTGATGACAAAAAGACCTTATGCCTTATTTAACCGAATAGGGATTTCAATTTGGGTA AACTATACTCACCTGCTTTGAGGTTTGACGTAATTACACTCGGTATATTCACCTCCCTTTTTTAGAGAGGTCAGCGTAATTTTACTATCATCCTTTAGAG GAGGAGGTGAGTATAATAATAATGATGGCATAAACTGAGGTCGGTGCAATATTTGAAACAAGAGAGATAATTAGTGTAGTTAAGCCAAAACTTAGGATAC ATTGGTGTAGTATCCTCAGATTTTACTAATATTGAAAGGCTCTATATTCCACTTTTATGTGTTTCCTTTGGATTTTTGTTAGAGATGACTTTCTAATTAG ATATACAGAGAGCTTTTCGATCCGGATCCATGCATCCTCAACCTCGGATTTTATGTTTGCAAGGATCTGCTGATGGGCCGGAACAGTATGTGGCAATCAT GAATGCAATATTTTCTGCACAGCGCTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCTAACAATTCTGCGTTCCTCCAGCAGGCTTCATACATAACT GGTGGCATATATTACAAGCCTCCCCAATTGGACGGGCTTTTTCAATATCTTTCAACGGTGTTTGCAACTGATTTGCATTCTCGTGCTTTTTTACGGCTCC CTAAATCTCTGGGTGTGGATTTTCGTGCCTCGTGCTTTTGCCATAAGCAAACAATTGACATGGGCTATGTATGTTCTGTATGCTTATCCATATTCTGTGA GCGTCATGATAAGTGTTCAACTTGCGGAAGTAACCAAACGTGGATGCAGTTGGATGGAAGCATGAGTAATGGCTTCAGCTCTTCAGGATCTGTATTTGGC CAAGCTAAACAAGATGTTACCTCAGCTAATAGCAAGAAAAGAAAAGCTTGATAATACATTATGCTCTATCCGGTGTACATTAAGGAAGGTGATTGCGTTT TCTTCCACAAGTAATCAAGGCACCATATTGCGTTTTCGTTTTCTTGGTGGGAAAATGAGGTTTGTTATGCAGATCTTTATAGATCTATAAACATCAGCAT CAATCCGCATAGTTAAGTGCTTAGCAAGATCTTTTGATATGGGTGTTGCATAAATTTTCATTAACCAAACATATCATTTCCTAAGAAAGCTGTGATTTAC TTTATGTTCACACTAGGTGAGCTATCATGAATTTTGTTGTATAAGAGAACGTCTTCAAAGTTGATACTGCTTTATGAAGAAATGTCTTATGCCAACCCAA GTTGATTCAGTTCTTGAAACTTGGGAATGATGAGCTATGCTCTAATTTCTGCCTAAGAGGATTCAATGGTTTTCTTCTGGCTTATACAGTTAAGTATTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_136580; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_277705
| Blastp | RNA polymerase II transcription factor B subunit 4 from Arabidopsis with 70.69% of identity |
|---|---|
| Blastx | RNA polymerase II transcription factor B subunit 4 from Arabidopsis with 69.78% of identity |
| Eggnog | Transcription factor(COG5242) |
| Kegg | Link to kegg annotations (AT1G18340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438573.1) |
| Pfam | Transcription factor Tfb4 (PF03850.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |