Ll_transcript_277708

• Id Trinity: TRINITY_DN43776_c0_g1_i6
• Name Transcript: Ll_transcript_277708
• Sequence: TCAAAATAGACTCATACAAGGCCTACTACACCACTAAAACTTAAACCAACATAACATTAAAAAAGAACAAAATAATTTAGAATATACACCCCTGTTCAGT GTGTAAAACCAGAAAGTCCGTTCATTCTCCTCCTCCTTCTGCGGCATCATCTCAAAACCGAACCACTCCCTGCACCGCCGCGCCCAGCCGTGTAAGGCCA CTCAAATACCCAAATCTGCCAAATTTCGTGGACGGTTCGGAGTTGGCACTTGTTGGTAACAACCATGCCTTCCGCCCCTTCAAAACTCTACGCAGATGAT GTTAGCCTTCTCGTCGTTACGCTTGACACCAATCCCTTCTTCTGGTCCACATTCTCGGTTTCGTTCTCCGATTTCCTCTCTCAGGTGCTTGCGTTTTTGA ACTCAATATTGCTTCTCAGCCAACTTAATCAATTGGTTGTTATTGCCACTGGATGCAATTCATGTGGCTATGTTTACGATTCTGCTTCCAGTAAGAACCA TGCTCCCCCTACGGCTTCAATGCCCGCGCTTTATTCCAATTTGCTGCACAATTTGGAACAATTCGTTGCTAGGGACCAGAAGTTGTCAAAGCCTGATCAT GATACTCAGGGGATTGTTCCGGCTTCGTTGCTATCAGGAGCGTTGTCCATGGCCCTTTGTTGTATCCTACTAATTGATAACTGCTCCATTTTGCATTTTG TTGATTGTATGTCTTTGTTTTTGGTTTGCAAGTTATTTGAATTCTGATGACAAAAAGACCTTATGCCTTATTTAACCGAATAGGGATTTCAATTTGGGTA AACTATACTCACCTGCTTTGAGGTTTGACGTAATTACACTCGGTATATTCACCTCCCTTTTTTAGAGAGGTCAGCGTAATTTTACTATCATCCTTTAGAG GAGGAGGTGAGTATAATAATAATGATGGCATAAACTGAGGTCGGTGCAATATTTGAAACAAGAGAGATAATTAGTGTAGTTAAGCCAAAACTTAGGATAC ATTGGTGTAGTATCCTCAGATTTTACTAATATTGAAAGGCTCTATATTCCACTTTTATGTGTTTCCTTTGGATTTTTGTTAGAGATGACTTTCTAATTAG ATATACAGAGAGCTTTTCGATCCGGATCCATGCATCCTCAACCTCGGGTGTGTATATTTGCTTGTCTGATTGTGAATCTGTTCTTAGATGAAATTTTATG TTACATTTGAATGTGGTAAGTTGCATCTGGATCTGCTAGTCAAATCACTTAAATGAGATTGGTTTTAGCAGTTTTCATTATGTTAGAGCCGGATGACGTT TCAAAAAATGATATTGAGAATCAGTCTGTCATATACTAGATGATGTTGTGTGGTTTTGGCTTTTTGAAACACTTTTCTTTTTAGCGTAGGGTCTTTGAAA GGATTAATGCTAGATATTGTGTTCAATATTACATCTATATGTTGTTTTACTTGTTTGTAATAACAAATAAAAAAGATTAAGAGTCCTTTTTAAACTACTT TTTGGTCAAAAATCGATTTAGATAGTTCTTAGTTGTAAATGATTGTTGACATGTAGTTGATTTTGAACTGGTTTAAACTTTAAAGCGGAGTTTGAGTTAT CAAACACCCTATGGACTTTCATTCAGGGGTGAAGCCAGAATTTTTGCTAATAGGGGTGCCAGGACTAAATCCATTCTTAATAAATATGAAGTTATACAAA AAAGAAGGACCATATAATGTGGGATAAGAAACTACATGAACTAAGTAAAAGTCCATGGTAAGTAACAGGCTGAAGAGCCTTTGAAGTGTAATTGTTTATA GTTGCAATTGGCTAATACTATATTACCTTGCTGGTCAATCTGCAGTGTGATAGGATTCTAAAGTTAAAACTTAATGAAAAACTGGGGGTGACCTGTTAAA CATTATCAGTGACTTTGTTTTAAATTGACGTGTAAAGGGTAGGTCATTGCTTTGTTATAGAAATCAACATTCTTAGTATATTCAGCAATTGTTTCTCCCT GTTTACATTATTAGTGATTTTTATTTTAAATTGATGTGTAAGATGTAAGTCATTGCTTTCTAATAGAAGTCAACATTCTCTTAGTATATCTAGCCATTGA TTCTTTTTTGCCTAATACTGTTTCCTTCTAGTTTGTAGATTTTGAATAATGACTTTTGTATTTACTAATTTATGAACAGATTTTATGTTTGCAAGGATCT GCTGATGGGCCGGAACAGTATGTGGCAATCATGAATGCAA
• Tissue: pods
• Gene name: LI_gene_136580;
• Additional information: details;

Expression of Ll_transcript_277708

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0.3
• PS2: 0.7
• PS3: 0.7
• PW1: 0.4
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277708

• Blastp: RNA polymerase II transcription factor B subunit 4 from Arabidopsis with 54.42% of identity
• Blastx: RNA polymerase II transcription factor B subunit 4 from Arabidopsis with 57.89% of identity
• Eggnog: Transcription factor(COG5242)
• Kegg: Link to kegg annotations (AT1G18340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438573.1)
• Pfam: Transcription factor Tfb4 (PF03850.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;