| Id Trinity | TRINITY_DN43809_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_352133 |
| Sequence | CCTTGTTCAGGTTGCTATTGAGGTTGAAGATCGTGCTCAACGTTCCGCGATAACTAGTGATTTTTCTTTACTTTACTTCAATTTTGATTTCATTTTTATG TTCCTTGCATATGTAATGTTCTTAGAATTGTGTTATTTGAGTTAAGACTTCATTGCCCCATGTGTTACAATGGTTTTACTGGTTCAGCGGTTTGAAGTGA GAGGGAGACAGGAAAATGGATGAAAATGTTGAAGGAAAAGGTAGAGGGAATTGGTGAATGATATAATTTGAAGGTTGTTGTATGTGCTCATGTTTCTCGG TTACTTTTTTAATCGGAGCGTAGAGTTGCAACTTTGTCCATATAATTAGATGCATATTTGGTACATCATCTATAGGGCATGATGAGGATTTGGTTGGATA TGCCCTTCAGACTTGCTCTCTTTTATGCTTACTAAGTTCAGAGGGTTTGGTTCCCGTAAAGATGGAAATGTTGTATGCATGTGTACTGTTTTTTCAGTCC TGTGGTTTATTTGGTTGGAAAGGAATGACAAGTTTTTTAATGATTCCTTTTCGTCTCTGGATTATGTCTAGTATAGCCATAGGGTTACGTTTTTCGCTTC GCGCTGGTCTATGTCCCTTGGGCTTTTTAGCAGGGTTAATATGCTAGATATGCAGTGAGTTTGGCATGCTTTTTTCCACGCCTTTTTGAGTAGTTTCTAC TTGTTTCTTTTTGTATTGAAGAGGATTTCTTACCCTCTTGTAACTTTCTCCTTTCTTTTTTAATAATGTTTCTTATCAAATAAAACTAAGGCATGATGAG GATGGAAACGTGTTTGAAGTGGAAACACCTTGTAACATTCTGTAGGATCCGGAGAATTAAATTTTATGTGATTTCTTTATGTAGGAGTAAATGCTGATGA TGTTCGAGTCACTGTAGCTGCTCCTGCTGCTCGTGGAGAAGCTAACAATGAACTTTTGGAATTTATGGGAAAAGTATATTCTTTACTCCCTGATTCTCTT TTTGTCTGGCTTACATTGTATTTTAAGATTGTTGCTTTGTGGATTGAACTTGATATGGTCATGGGATGTAGTCAAAAGCAGCCTCTTCACTCTTTTATGT TTGTCGTTGTGTCTCTAGTACTCCTCTTTTCTCTCTGATCAATCATAATTATCCACCGGCATCTTAACACTAACTTTTTTTGACATAGGTTTTGGGTTTG AGATTGAGTCAGATGACTCTTCAGAGAGGTTGGAATAACAAATCAAAGCTTCTTGTGGTGAGTTACATAACTATCATGTATACAGTATACCTTCAAATTA AGCATCCACATTAGTATGAATTTGTATTTGGGTGCATTGTGTTCTTTCTAAATGATGCTGATACCGTAGAATTATATTTATGGCAGTGGTTAGCGAACAA AAATGATTTCTAGTTCCCTCTTATAAGATGTTGACCCCTATTTAAACTATTTTGAGCATTGGACAATTGTTTCAGGTTGAGGATTTGACTGCTAGACAAG TATATGAGAAGCTTTTGGAAGCTGTGCAACCTTGACGCCATTTTTTTAGCTTTATTGTGCTTGGGGTTCGGGACACAAATGTTCCTGTGCAATCCAGGTT GAATCTCCATTTTCGGCAAACAACAATTCGGGGTTTTGATGTTATACTTTTACTTCGGAACACACACTAAGGCCATTGCCCCATTTTGCTTGTATGGGTA CCCTGGGAATTATATAGGATCCTGAGTTAAGTTTGACTCATTCTATGATCATTGAATATTTCATAGTCGAGTGCTTCAACAAAAATGAAATGAAATGTAA TTGAATGTGAAAAACAGTTAAAAAGTCAATATTGCAGTTGAAAAACCTTAGTAAGTTTAACCTTATGGCAACACATTGTTTGATAGTGGATTACACCATG AATTTAGCTATCAGAGAATAAAGTACCAACATTTTTCATCGTCATATACTCATATATGTTTGTAGGATGAATAATACATTTATCAATATCATGTTCTGCA TGATGCATATATAAAACATATTATAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_136626; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352133
| Blastp | - |
|---|---|
| Blastx | UPF0235 protein At5g63440 from Arabidopsis with 90.91% of identity |
| Eggnog | Uncharacterised ACR, YggU family COG1872(ENOG41123AI) |
| Kegg | Link to kegg annotations (AT5G63440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_006605297.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |