Id Trinity | TRINITY_DN43867_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_352334 |
Sequence | AAAAAAGGTCATCATTAGACACTTGTCGGGAGGGACAACACAACCTAAAAGATTAGTTTCTTACTCGAAAGTTGAGGGAGAAATAATGATATATTTTTGT ATTATGATAATTACCCCATCAAACCCAATGAAAATTTTAGCATATTTCATTTCAATGAGCCGTGTTGATTATTTCACATTGTGAACATATAACATCACCC TCCTCTTAGGAATAAGGCATAAGTCAAACGATGTTGCTGAGATGTTGCACTGGAAAACTACCCTCCATGCTCTCCAGAGTTGTAGTTGCACTTGTCCTTT CTCATCTTCTTATCTATGAAGAGGTTCAACTTTTAGAGGCACAATCTTGGGTACAAGGTGGTTACTGGTTTTATGGGAGTGAATTTCCAGTTTCTGACAT CAACTCTGCACTCTATACTCACCTCATATGTGCTTTTGCTGATGTTAACTCTTCCTCCTATGAACTCTCTATCCCCTCAACTGATGAGAAAAAATTCTCT TCTTTTACAAGCACTCTCAAACTCAAGAACCCTTCTATATCTACCCTTCTTTCCATTGCAGGGGGGAATGCTAATTATAGTGTCATGTCATTTATGGTAA GTAGTGTTTCTTCAAGGAAATCTTTCATTCAGTCTTCAATAAGAGTAGCCAGGCTTTATGGTTTTCAAGGCTTGGATTTGAGTTGGGTCTCTGCTAACTC AAGCTCTGACATGAACAATATGGGAAGGCTTTTTGAAGAGTGGAGAAAAGCTGCAAAGTCTGAGGCAACAAACTCTACTAATCCGGAAATGATCTTAACT GCAGCTCTTCCGTATCGACCTGATTCGGATTTTGCATCTTATCCTGTGGAGTCTATTAGAATTAACTTGAATTGGATACATGTTTTGGCTTATGACTATT ACTCGCCTGAATGGACAAATTTTACTGCTGCACATGCAGCCTTGTATGACCCTTCAAGTGATGTAAATACAGATTTTGGTATTAGGAAATGGATTAATAG TGGAGTTCCTGCTAGCAAATTGGTTTTGTCTTTGCCTTTCTATGGATATGCCTGGAAGCTTAGAAACCCCGAGGACAAAGCAGTAGGTGCACCAGCAACA GGTCCAGCTATTACAGAAGGTGGAGATATGAGCTATAAGGACATCAAGGATTACGTTCAAAGATATGGAGGAGGGACTGAATTTTATAATGCTACTTATG TAGTCAACTACTACACAATTGGATCAAGTTGGATTGGTTTTGATGATGTCCAGGTTGTCAAAATTAAGGTATCTTATGCTAGGGGGAAAAAGCTACTTGG CTATGTTGTGTGGCAAATTCCCTATGATGATGACAATTGGGTCCTTTCTAGTGCAGCAGCTGAACAGGTTGACAACAATGGACACCGAAATTGGCGATTA TTAGTGATAATTTTGACCACAACTAGTATATCTGTGCTTCTATTAGGCATCACAATTTACTACTTAAGGAGGAGATTACTAAAATCAAAGGGAATGACTA ATGAAGCTAGAGAAGACCGGCCTAGTAAAGAAGCAGCAGGACATTTTCATGGCAATGCTCCTGATCTGCAAGTCTTTAGCTTTTTGGATATTGAAGTAGC CACAAATAGTTTTTCAGTTGAAAATAAGCTTGGCCAAGGTGGCTATGGTCCTGTTTACAAGGGCATCCTACTAGATGGCAAGGAAGTAGCTGCGAAAAAG CTATCAGCAGCTTCTACACAAGGATTCGAGGAATTCCAAAATGAGGTAACACTTACTGCAAGACTACAACATGTGAATCTTGTTAGGCTGTTGGGTTTCT GCATTGAGAGGCAAGAACAGATGTTGATCTATGAGTACATGCCAAACAAAAGCCTTGACTTTTACCTCTTTGGTCAGCAATCCTCGCTTGAACCTATGAT ATGAAGTTCCTTTAATAGTCCTTAGCTAAACTATTTGGATGAAAATGATTTTCTGTTAACTGTTATTTGTTAACCAATTTTGACACAGACCCTATTAGGT GTTATCTTCTGAATTGGAGCAAACGCGTAGCCATCATTGAAGGAGTTACTCAAGGGCTTCTATATCTACAAGAATATTCTAGGTTGACAATAATTCATAG AGACATAAAAGCTAGTAACATTTTGTTAGATAACGAGATGAAGCCAAAGATATCAGACTTTGGTATGGCAAGAATATTCACAAAAGAAGACCCAGAAGCA AACACGGACAAGATTGTTGGAACATAGTAAGTATTTGAATCAATAAAGCTCATTAGAAATTTCCTCTAATGTACATCATCATATTGCTTTATCAATCGAT GCAGCGGTTATGTTCCTCCCGAGTACGTTAAGAAAGGCTTGTACTCCACTAAATCCGACGTGTACAGCTTCGGAATTCTGCTTCTACAAATTGTGAGTGG CAGGAAGACTGCAAGATTTTATGGCGAGCAGGAAAATTTAAACCTCATGGAATATGCTTATAATCTGTGGAAAGAAGGAAAGTACATGGAGTTTGTAGAT CCTTCACTTGATGACACATCTTCTCCATGTAAGTTATTGAGGTGCATGCATATAGCTCTCTTATGCGTGCAGGAAGATGCAAATGATAGGCCACCCATGT TGGAAATTTGCTCTATGTTGAGGAATGAGACTATTCTGGAATTCCCAAAGAAGCCTGCATTTTCAAAAGAAAAAGATGTGCAGGAGCCAAATAAGCAAGA AGCTGAAACTTCGGTTAATGATGCAACAATTTCTCAACTTGTGGCTCGATAATAGTACTGCTGCTATTGTAAAAAAATGGACTTGAAAACTCTAGTGAGT TGTTGCAGTCCCTAGTGAAAAACATTGTCTAAATGCTTGCTTTTTTGTTATTATCACTGTCAAGTAGTCAATACAATAATTAAATAATTCTTTTCTTATT CTTTGGAATCACAAGTATACAAAGAAAAGTATTTTTGTACTGTTATGATATATCATATCATTATTATAACTCAAAGGCCCAGACATCTAACATCATAAAA GTTTATGAGGTAGTTCTGTTTGTCTTTGGCTTTTTGTCCCCGATCCCCATGTACCATGAAAAAAGTATAGGTGTTTATGAACTGTATGATTTCAT BLAST |
Tissue | pods |
Gene name | LI_gene_136726; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352334
Blastp | Chitotriosidase-1 from Homo with 34.13% of identity |
---|---|
Blastx | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 from Arabidopsis with 43.45% of identity |
Eggnog | chitinase(COG3325) |
Kegg | Link to kegg annotations (1118) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463746.1) |
Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |