Ll_transcript_352005

• Id Trinity: TRINITY_DN43881_c0_g1_i6
• Name Transcript: Ll_transcript_352005
• Sequence: ATTACGATTCTTTTTACTCGAGCTTCAAGCTGTCAAATAAAGTGTGATTTGTTTATTAAAAATTACAAACAAACAATATCCATACAATGCTGGAAGTTTA TTTTCTAGTTTAGATTAATGTTGATAGCCACATATTTCTGGATAGTTATTTTTGTTATGAAACAACAGCACATTAATTAGCCTCGTCTTATTATATTCTA ATACTCATTTTGTTTTCATCTTTTTTGTTGATTCATAAGCCCACCTAATACGATGAGGTTTTGTTGTTGTTTCTTTATATATTCAACTGGAACTTCATTT TAATACTGTAGTTGGCACTGAAATGTATCTTGCAGGTTTCTGGAATAATTGATGATCTTGACTGTGCAAAATTTGTCCTGGACTCTGCTGAAGAAGAGGC TGGAAGGGTTGTTAGAGAATTGCTTCAGCAAGGTAATTCAGCCTCAGATTCAGTGGACAATTCTGAAGTTCAAGCTCTTAAGTTTGCAGCACCAAGACTT AATATTACATCTCCAAAGGCCATCTTAATAGAGAAACGATCTATTAAGAAGTTGCTAGATAAAATTGGACCAAATGACCCGAAAAAGAAAATGATCTTGA GATATCTTTTGTACCTACTGAAAAAGCATGGAAACCTCATCTTGGAAGAACAAACGGAGAAGGCCTATTCTCCTAATGAAGAACCTATTGCAACCGATAA CTCTAGTCATGACTCTCTTCAAAGGCATCATGTTGAGTCTGAGTCTTTAGACTATGGTCAGTGTAGAACTCAAACCAGTGAGTTGGGTACAGTTACACCT CCGGAGGAATACAAATGCCCAATATCGTCAAGATTGATGTATGACCCTATTGTAATCGCTTCCGGACTGACATATGAAAGGATATGGATACAAAAGTGGT TCGATGAGGGTAATGATATATGCCCAAAAACTAAAGAGAAATTAGCTCATATGGGATTGACTCCTAACATTATCATGAAGGAGTTAATATCAAAGTGGTG CAGGAACAATGGCGTCTCCCTCCCCGATCCAAGTAGGCAAGCAGAAAACTTTCATTCATGGGAAACTTCCTCCACTTCCATTAAGAGTCTTGGAAGTTAT TACAATGACTTGAACTTGCCAATGGATCATAGTTTCATGTCACTTGGATCCTTGGATGCAAGTTATAGTTCAGATGTCTGGCATGCTAAGATTACTCATG GCTCAAATTTGATTAAGAATAGTGACAATTCTCACAAAGATAGAGCTGATGCAGCGATACAGGATACAGATTTGATGCTTTTGTCTGAACTCCATGATCT TCAATGGGATTCTCAATGCAAGGTCATTGAAGATCTGAAAGATCATGTGAAAATCAATCACCAAGCCTTTTCTTCTGTATCACCTGAAGATTTCATTAAA CCACTCGTCAAATTTCTGAACAATGCATATGATCAACATGAGGTTAAAGCACTGAGAGCTGGAACTGAGCTGCTATTGGAATTAGTGAATAACTGCAGAA ATGGCCTGACTAATTTAAGCGAAGATGTGTTCAGCATGTTGACAAGTTTTCTTGATTCAGAAGTGATAGGAGAAGCTCTTGCCATAATGGAAGAGCTATC TGGATATTGGTCTAGTAAAGCTAGAATTGCAGCATCTAGTGCACTCACTTCTATTTTAAATGTGCTTGATTCTGATGATAAAGAGTTCCAACAACGAGCT ATCAGAATCATGTATAATTTGTCCTTCAATGGAGAAGTCTGTCACCACTTTTTATCTCTCAAGTGCATCCCAAAATTGCTGCCATTTTTTATAGACAGGT CCCTTTTGAGATATTGCATCTGTATATTGAAAAATCTTTGTGATACTGATGAGGGTAGGAATTCTGTTGCTGAAACAAAGGGATGCATATCTTCAGTTAC TGAAATACTTGAGACAGGTAGCAATGAAGAACAAGAACATGCACTGGTTGTTCTAGTCTCTTTATGCTCTCAACGTGTGGATTATTGTAAACTGGTTATG GATAGAGATATTATCCTTCCTCTTGCCTATATCTCCAAGAATGGAAATGATAAAGGAAAAGCAGCTGCGATGGAACTGCTACGTCTTTTGAGAGACGTCG ATTATGTTGAGAATGAAGATTGCCTTGAACCAAATCTCAACACCCCTCAAGAATCCAACAATCACCCTCCTCAAGAAAAGAAAACATCAAAAGGAACCTC ATTTATGAAGAAACTATCATTGTTCTCAAAATCCAGTTCACATGCATCAAAATCCAAGAGATGAAACTGAATTCCTCAGCATTTCAACCCATAGTATCCT TCTGATTCGTACTACGGAGACTGCAGATTATTTGCCTGATAGGAGGCATTTTGGATTTGCTAGGTAGCAGACATGCTTTTAAGATGGAGCTTAATCTTTG TGGATATAGCATTCTAAATAGTCATTTACAACACCTCTGCTGCTTAATTTTGCACTATACTACAGCAGATTGTATAAGGTTGTAAAGTTTTGCTTATGAT TTGATCTATTTTTTAGATATTCCAATTCAAGGCTTGTCTCTTGTTAAGATAGTTGATAGTTTTCCCTTTTCTTCTTCCTGTCAACTTACTAGGGACCAGT CACTTTTTATTTGGGGGTTGATTCTTATTGTATATATATTGCACACTTTCATATTTTGAGCACTGATTGTAAAATAGATACTGATTAGGGCTTTCATGAT GACTAATGGCGTTTGAAAAGGTGATGAAAATTGTATTTTTAGCTCTTGCTAGACGCATGTATATAATAAAGTCACCTGCATGGCTGAAT
• Tissue: pods
• Gene name: LI_gene_136749;
• Additional information: details;

Expression of Ll_transcript_352005

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.5
• PS2: 0.4
• PS3: 0
• PW1: 0.4
• PW2: 2.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_352005

• Blastp: U-box domain-containing protein 5 from Arabidopsis with 38.36% of identity
• Blastx: U-box domain-containing protein 5 from Arabidopsis with 34.55% of identity
• Eggnog: U-box domain-containing protein(ENOG410XRTN)
• Kegg: Link to kegg annotations (AT4G36550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421056.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;