Id Trinity | TRINITY_DN43889_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_352177 |
Sequence | TAGGAGTTCTTTGCTGATTGTGACAGGTGTGAAATAGGTGACAAAACCTATGTATAGGATATAGATGAGTTTCGATGTTGACAATGCTCTAAAGTGAAGA ATCAGCAGAAGTGGAAGAGATCATTCCAAGCTGCAAAACCCCATGGAGTCAAACCAAGACCAACAGACTCCCAAATCCCATCGTTTTGATCTCATAATCC TTGGTGCCTCAGGTTTCACTGGCAAATATGTTGTGAAAGAAGCTCTCAAATTCCTCAACAACCCATCTTCCCCACTCAAATCCATAGCCCTAGCAGGCCG CAACGCAACAAAACTCGCCCAAACCCTCCAATGGGCTGCTCAACCCAACCCTCCGCCTTCTCTCCCCATTCTCACGGCTGACACCACCGACCCTTCATCC CTCCGCGCCCTCTGCAACCAGACTTCCCTCATCCTCAACTGTGTCGGCCCTTTTCGCCTCCACGCCGAGCCTGTCGTCGCCGCATGTGCTGACACCGGCT GCGATTATTTGGACATCTGTGGAGAGCCGGAATTCATGGAGCGGATGGAGGCTAATTACCATGACAGGGCTGTGGAAACCGGTTCGTTGGTGATTTCGGC TTGTGGGTTCGATTCGGTTCCTGCGGAGCTGGGGTTCATGTTCAATTCACGACAGTGGGTGAGTCCGGCGGTGCCGAATCGGGTAGAGGCGTTTGTGAGC TTGGAGTCCGAGAGGAGGATCGTGGGTAACTTCGCGACGTATGAGTCCGCGGTTCTTGGTGTTGCTAATGCCCACAAGTTGCAGGAGCTGAGAAGGTCCA GACCCAGAAGAGCTAAGCCTGTGGTAAGAGATAAAATGTGGTGTTAATTTGATATTAAGGAAATAACTTTATTGTGATGTTACTTTTGATGAAAATTCAA TAATGTTAACAAAACTGTATTAACAACTAAGGAGGTGTTCATTGGTTTTACACAAACTAGCCCTATGAATTTTCCGTGATCACAGTTGTTATTAATGAAA TTAATGTCATTAGCCATTTTGATGTGGATTGTGGCCTTGACGGTTTGGAATTGTGTAATTAAAAAATGTTTTTGAATCTGAAAGGACCTAAATGCGGTTT GATGCGGTTACATTGTGTTCCAATATGGCCACAAAATTGTAATATTGTGGGGTGATGTGATTGCAAAAATCACTTCAAATGCTTTATTGTGACTACATCA AGTGATACTTAGTGGCTTTTGTCAATAGTAAAGAAGGCTGAGTAGTGGATGTGTGAGGACCAAATTATAACAAATCTAACGGCAATTACTAATATTGTCT AATCTTGAATAGATTGAGGACCAAATTGAAATAAATACTACTTTACTTAGAAGACTAAGTTGGAGAAAAAAACTAAGTTCAGGACAAATATCTATTTTTC CTATAAGAAGTAATGGTTGGGCTACAAGGTTCAGGACAAACCGATCTAGGTGTACCGTTTTCTCTTATGAATAAGAAGTAATTCCTCATTTCGTAGATGA AAAAAGTTTGGGCTACTTCCTCAATCAATGCCCGGGATCTGCTCGAAGCATGGTTGTTTTAGTTTTCAAGTACAGTCGGCGATTTAATATTTTTTGGTTT ATAATAGGTAAGTTGTGATAAAGTTAATGCATATTTCTCTTTGGCAAATATGTATTACTTGTGGACATTGTAGCATTGGCTACAGTTTCCGTAAAGTCAA GTAGGTTCAACAAGAAATCCAGTTGTCTAATTGTCTGTGTCCTGGTATGAGACAAATACTTGCGTGATTATCCAATAACTGTGAAGCACACTAACACAGA CACACACATGCTGACATGAGACATCAAATGACACGCATAGGATGATGCAGCAAATTGAAATTTCCCCTAACGATGGGACATAGTATGTATTTGCGAACTG CAAAACAAGATTATGCAGAAATTTGGCACGGACTTTAGTTCTTTTAAATGCATTGCATTAATGATGAAACATTTGTACCTTCAAAATTGTAGGTAAAGCT TAAGAGTAACTAGGGTAGATGTGTTGAGGTGGAAGTGAGATGCTCAGAGTACAATAGCTGTTAATTTTACTTAGGGTGTATAATGGCTACATTCATACTG CATTTGGCCGTCTTGGTGTGTATACATCCGATTCCAAATCAACCCCTCAATTTGTTCTGATTAACAACTGCTCCATGTGGGATGAAAACAACTTAGAACC AAGTATATGCTGTGAGCATAATAATTTCTCAAATATGTATAGATTCTATAAACAAGAGAAGGTATTTCCATTATACAATCAGATCTTCAGATGTGCCTAT AAATTGTTAGCTTCTTTCCAAGAACACACATATCATAATTAACTTACTCCCACCCTTTTCCCTTCTTTCTTTTTCTTGTGTTGTTTATTCCGACTACTCG GAGTGTCATTGTCTAAGATTAACTTACAGCATTGTATGCATTATTTATAACCTTGTATAGCGCTTTCCCTTTCCATCTTTTATATCTTTAATATTATGTC ATTCTATCGGCTTTTATGTTCATGGTTGTAGGTTCCTGGGCCTCCTCCCTCAAAAGGAGAAACTATAGAAAACCAGAAGAAACTTGGCCTTTGGGCAGTG AAGCTACCTTCAGCAGATTCAATTGTTGTACGAAGAACACTTGCTATTCTAACAGAAAACCCCCATGGTCTCCCTGGGTTGAACGAGCATGCTGAGATGA TTGAGAAAAGGGAAGCCTTCTGGTCATCTGTGAAGGCAGCTCATTTTGGTGTGAAAATAGGATCAAAATCTTTATTAGGCATTTTCCGGATCATTATGGT CGGAATTTTCATTGGCCTTTTTGGAAGTTTTAGCTTCGGAAGACACCTTCTTTTGAACTTCCCTTCGGTCTTTAGCCTTGGCTGGTTCAGTAAGAAGGGC CCTTCTGAAGAGGAAGTGAAAAGTGCTTCTTTCAAGATGTGGTTTGTTGGACATGGTTTTAGTAATGAGAGTCTTGCATCACCAAAAAACACAAAACCTG ACTTCGAAATTGTAACAAGAATAAAGGGACCTGAATCTGGATATAGAACCACTTCAATAATCCTTATTCAGTGTGCTATCATTGTTCTCAGCCAACGTAA CAACCTTCCAAAAGGAGGAACTTACCCTCCAGGGATTATATTTGGTGCAACTGATCTTCAGGAGAGACTTCAAAGAAATGGAATTTCCTTTGATGTCATA TCAAAATCTACAATTTCTTCTTGATTCATGCAACATCATCCTATAGTCCCAAAACAGTACACAGTCAAATATTTATGTACCGGCAGTATAAAGATTTTGA TACACTT BLAST |
Tissue | pods |
Gene name | LI_gene_136761; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352177
Blastp | Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 from Arabidopsis with 69.41% of identity |
---|---|
Blastx | Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 from Arabidopsis with 76.47% of identity |
Eggnog | saccharopine dehydrogenase(COG3268) |
Kegg | Link to kegg annotations (AT5G39410) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456838.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |