Ll_transcript_425484

• Id Trinity: TRINITY_DN43914_c0_g2_i1
• Name Transcript: Ll_transcript_425484
• Sequence: CAAAACCACACTCTCTTCATCACACCGTGAACCAAACCTCCCCACCCTTCTCCGCCGCTGTCTCCGTCGCCTTCTCCTCAGGCCACTTCACTCTCCAAGG GAACCAGTTTCATATTCATCTTCTATGGAATCAACCAATAGATTATGAGCTCATACATGAGTCTGAACATACTCAGCACTCTCCTCTCTCAGAGTGGTGG CGAGCTCTTGTTCTCTGATTTATTGAAGTACCAGATCAATATCATAAATGTCAACCTATTAGGTTTCAACTCTTGGAGTAATCTATCGCTCTTTCGGATT CAAACAAACATAAATTACTACTTTTATCCACAGCTATCTAATCCATCCCAAGCCCGCACCTAATTTTACAATCATTGTTTTTTGGTGATTTTCTGTGTAA CACAATGTCAGTCCACAAGTCCCTTTTGAAGATCTTTAGCAAAGGTGTCTCTCTTCCTTCAAACAAACACGAACAACTTGCTCACGACATAGTCTACATT CTCATTAATTCAAGATTTGCACCAAACATGGAACTGCAATCTTTGATCCCTTGCATCACCCCCCATGTCACCCACCACGTTCTCTCCAGCCCCTCTCTCC CTCCTCAGTCAGCCTTAGCCTTTTTCCACTTCCTCAGAACCCAACATTCCCCAGCTGCCCAAAAGTTTGACCTCAAGGCCCATGTGATCCTCTTCTCAAA GCTTTTCGAGGCTCGGAAATTTGCCTCCATGAAGAGCATCTTGAACAATGTTGTCACGGATGTGGGAATTCGTTGTCCTGTAAAGGGTATTCTGTCTTTG CTTGATGAATGTGACTTTAATCGCCAATTTACTGAGAAGCTATGTGACATGATGTTCAGGGTGTGTGCTGATAATAGATTGTTTGAGGAAGCTTTTGGGG TCTATGATTATGCTGAAAGGAAGGGTTTGGTGATTGAGGAGAGGTCTTGCTTTGTACTCTTGCTTGCTCTGAAGAAGTGTGGTGAGATGGAATTGTGTCT CCGGTTCTTTCGCCAGATGGTTGAGTCTGGTAGTCTTGAAATCAAGGTTCAATCTTTGACACTTGTGCTTGATGGTTTGTGTAGGAGAGGAGAGGTTGAG AGAGCTACAGAGCTGATGGATGAGATGACAAGTAAGGGCATTGTGAAACCAAATACATATACTTACAATACGTTGTTGAATGCATATGTTGGGAGAAAGG ATCAAAGGGGTGTTAATGAGATATTGAGATTGATGGAGAAGGAACAAGTTGTTCGTAGTGTGGCTACATATAGTATTTTGATTCAGTGGTATGCGAGTTG TGGCGACTTCGGGGAAGCTGAGAATATATTTGAGGAAATGCACCGGAGAAATATCAAAATGGATGTTTATGTGTATTCGTCCATGATAAGTTGGAATTGT AGGTCTGGGAATATTAAGAGGGCATCTGCTTTGTTTGATGAGATGTGTCAACAAGGCATTGTCCCTAATGCTCATACTTACGGGGCTTTGATTGATGGTT TATGCAAGGCAGGCCAAATGAATGCTGCAGAAATTTTGCTAGAAGAGATGCAAACTAAGGGAATTGACCCGAACATAGTAATATTTAATACAATGATGGA TGGTTACTGTAAAAGAGGAATGATAGATGAAGCTTTGAGACTTCAAGTTATCATGGAAAGAAAAGGTATTGAAGGAGATGTGTTTACATACAACATTCTT GCTAGTGGGCTATGTAAATTGCATAGGTATGAAGAAGCCAAGTGGACCTTAAGTACAATGGTAGAGAAAGGAATAGCTCCAAATGTTGTGAGTCTCACTA CATTTATCGAGATACATTGTAAGGAAGGAAACCTTGCACAAGCTGAGTGGCTCTTTAGGGATATGGAGAAAAAGGGAGAGGTGCCTAATGTTGTTACATA CAATACTCTAATAGATGCATACAGCAAAAAAGAAAAAGTTAAGAAAGCTCATATGCTAAAATCTGAAATGGTCGAGAAGGGGTTATTGCCGGATGTCTAT ACATACACATCGCTAATACACGGCGAATGTATTGTTGGCAGGGTAGATGAGGCAATGAAGCTTTTCAATGAAATGTTGTTAAAGGGCATAACCGGAAATG TTGCCACATATACGTCAATTATTTCAGGTTTATCCAAGGAGGGGAGATCAGATGAAGGTTTTAAATTGTATGATGAGATGATCGCAAAGGGCCTAACACC TGATGATAGAGTTTTCACTGCACTTGTTGGTAGCCTTCATAAATCTTCTTCTAATAGTGCCATACAATAAAGTGAAAACAAGGAACAAAAGTAAACACTT AAGAGACCAAATTTTGGTTTGCCAAGTTCATGGTGGATAATGCTTCAAGGTCAAAATGGTTGCCTTTGTTGAAGCCCACGCAAGAGGATTGTGTCAGAGG TGATTCCAGCTTTCACATTACCAAAATTAGAGTCTGGATACTGAGGATAATGTGCAAACATTCAGGTGTTGGGGAACATCAAGTTGGAACCAATTTACGC ATAAATAGGAGCTTATGGATGAAGCTAGTGGAAAGTCTTCAGTGCTAGTTATGTATGTTTATTATAGAATCTGTATGATTTCATATGCATTTAGTTAATC TAGAGCCTATAGAAGTATATACAATTTCTGAGTTCTGACAAAGAGGATTTTGGATCTTCTAGGCAGAAAAAGGGAAATGAAAACCTTCACATTTTGAAAG TGTTCTGTATCCTTCAATATATGGGGATGGAACAGCATTGAAAAAGTTATATGTATGGGATTATTTATAAATCAAGTTGTCCAGCAAATTATGGTTTTTC ATTGTGCAATTCTTCTTTCACTGCTAA
• Tissue: pods
• Gene name: LI_gene_136806;
• Additional information: details;

Expression of Ll_transcript_425484

FPKM

• PAB: 2.6
• PNAB: 3.5
• PS1: 4.2
• PS2: 4
• PS3: 3.7
• PW1: 2.6
• PW2: 3.1
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425484

• Blastp: Pentatricopeptide repeat-containing protein At2g32630 from Arabidopsis with 50.53% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g32630 from Arabidopsis with 50.53% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G32630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415618.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;