Ll_transcript_425486

• Id Trinity: TRINITY_DN43914_c0_g2_i2
• Name Transcript: Ll_transcript_425486
• Sequence: CTTCACTCTCCAAGGGAACCAGTTTCATATTCATCTTCTATGGAATCAACCAATAGATTATGAGCTCATACATGAGTCTGAACATACTCAGCACTCTCCT CTCTCAGAGTGGTGGCGAGCTCTTGTTCTCTGATTTATTGAAGTACCAGATCAATATCATAAATGTCAACCTATTAGGTAAACGGCCTGATGCCTTCATG GATATGTATATCTCCGTAGCCTTTTCTTCCATGTCAACTTTTATATACTCTCCAATGACCTCAGAATACATTATTTTGTCAGGTTTCAACTCTTGGAGTA ATCTATCGCTCTTTCGGATTCAAACAAACATAAATTACTACTTTTATCCACAGCTATCTAATCCATCCCAAGCCCGCACCTAATTTTACAATCATTGTTT TTTGGTGATTTTCTGTGTAACACAATGTCAGTCCACAAGTCCCTTTTGAAGATCTTTAGCAAAGGTGTCTCTCTTCCTTCAAACAAACACGAACAACTTG CTCACGACATAGTCTACATTCTCATTAATTCAAGATTTGCACCAAACATGGAACTGCAATCTTTGATCCCTTGCATCACCCCCCATGTCACCCACCACGT TCTCTCCAGCCCCTCTCTCCCTCCTCAGTCAGCCTTAGCCTTTTTCCACTTCCTCAGAACCCAACATTCCCCAGCTGCCCAAAAGTTTGACCTCAAGGCC CATGTGATCCTCTTCTCAAAGCTTTTCGAGGCTCGGAAATTTGCCTCCATGAAGAGCATCTTGAACAATGTTGTCACGGATGTGGGAATTCGTTGTCCTG TAAAGGGTATTCTGTCTTTGCTTGATGAATGTGACTTTAATCGCCAATTTACTGAGAAGCTATGTGACATGATGTTCAGGGTGTGTGCTGATAATAGATT GTTTGAGGAAGCTTTTGGGGTCTATGATTATGCTGAAAGGAAGGGTTTGGTGATTGAGGAGAGGTCTTGCTTTGTACTCTTGCTTGCTCTGAAGAAGTGT GGTGAGATGGAATTGTGTCTCCGGTTCTTTCGCCAGATGGTTGAGTCTGGTAGTCTTGAAATCAAGGTTCAATCTTTGACACTTGTGCTTGATGGTTTGT GTAGGAGAGGAGAGGTTGAGAGAGCTACAGAGCTGATGGATGAGATGACAAGTAAGGGCATTGTGAAACCAAATACATATACTTACAATACGTTGTTGAA TGCATATGTTGGGAGAAAGGATCAAAGGGGTGTTAATGAGATATTGAGATTGATGGAGAAGGAACAAGTTGTTCGTAGTGTGGCTACATATAGTATTTTG ATTCAGTGGTATGCGAGTTGTGGCGACTTCGGGGAAGCTGAGAATATATTTGAGGAAATGCACCGGAGAAATATCAAAATGGATGTTTATGTGTATTCGT CCATGATAAGTTGGAATTGTAGGTCTGGGAATATTAAGAGGGCATCTGCTTTGTTTGATGAGATGTGTCAACAAGGCATTGTCCCTAATGCTCATACTTA CGGGGCTTTGATTGATGGTTTATGCAAGGCAGGCCAAATGAATGCTGCAGAAATTTTGCTAGAAGAGATGCAAACTAAGGGAATTGACCCGAACATAGTA ATATTTAATACAATGATGGATGGTTACTGTAAAAGAGGAATGATAGATGAAGCTTTGAGACTTCAAGTTATCATGGAAAGAAAAGGTATTGAAGGAGATG TGTTTACATACAACATTCTTGCTAGTGGGCTATGTAAATTGCATAGGTATGAAGAAGCCAAGTGGACCTTAAGTACAATGGTAGAGAAAGGAATAGCTCC AAATGTTGTGAGTCTCACTACATTTATCGAGATACATTGTAAGGAAGGAAACCTTGCACAAGCTGAGTGGCTCTTTAGGGATATGGAGAAAAAGGGAGAG GTGCCTAATGTTGTTACATACAATACTCTAATAGATGCATACAGCAAAAAAGAAAAAGTTAAGAAAGCTCATATGCTAAAATCTGAAATGGTCGAGAAGG GGTTATTGCCGGATGTCTATACATACACATCGCTAATACACGGCGAATGTATTGTTGGCAGGGTAGATGAGGCAATGAAGCTTTTCAATGAAATGTTGTT AAAGGGCATAACCGGAAATGTTGCCACATATACGTCAATTATTTCAGGTTTATCCAAGGAGGGGAGATCAGATGAAGGTTTTAAATTGTATGATGAGATG ATCGCAAAGGGCCTAACACCTGATGATAGAGTTTTCACTGCACTTGTTGGTAGCCTTCATAAATCTTCTTCTAATAGTGCCATACAATAAAGTGAAAACA AGGAACAAAAGTAAACACTTAAGAGACCAAATTTTGGTTTGCCAAGTTCATGGTGGATAATGCTTCAAGGTCAAAATGGTTGCCTTTGTTGAAGCCCACG CAAGAGGATTGTGTCAGAGGTGATTCCAGCTTTCACATTACCAAAATTAGAGTCTGGATACTGAGGATAATGTGCAAACATTCAGGTGTTGGGGAACATC AAGTTGGAACCAATTTACGCATAAATAGGAGCTTATGGATGAAGCTAGTGGAAAGTCTTCAGTGCTAGTTATGTATGTTTATTATAGAATCTGTATGATT TCATATGCATTTAGTTAATCTAGAGCCTATAGAAGTATATACAATTTCTGAGTTCTGACAAAGAGGATTTTGGATCTTCTAGGCAGAAAAAGGGAAATGA AAACCTTCACATTTTGAAAGTGTTCTGTATCCTTCAATATATGGGGATGGAACAGCATTGAAAAAGTTATATGTATGGGATTATTTATAAATCAAGTTGT CCAGCAAATTATGGTTTTTCATTGTGCAATTCTTCTTTCACTGCTAA
• Tissue: pods
• Gene name: LI_gene_136806;
• Additional information: details;

Expression of Ll_transcript_425486

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0.4
• PW1: 0.1
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425486

• Blastp: Pentatricopeptide repeat-containing protein At2g32630 from Arabidopsis with 50.53% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g32630 from Arabidopsis with 50.53% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G32630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415618.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;