Ll_transcript_425476

• Id Trinity: TRINITY_DN43916_c0_g1_i5
• Name Transcript: Ll_transcript_425476
• Sequence: CCAATGTCGGTGTTGCTATCATGCTCTTCTCCATTCTCACTTCTGAAAACATCACCACCCACTCACTCTTTTCCCAAACCTTCTTCTCTTTCCTTCTTCA GATTTTCTCCACCTTCCCTTTCTCTTCACTCCACTCCTTCTAACACTTCCATTTCAATCAGGGTCTGTCTCTTTCTCTTTTCATTTTCCACTTTTCTATT ACCTTTTTTTGTTAATCAATTTTATATTAGAAACAGACCCAACACTCCATTTTAGATTAAATTGTATGTAATGCACTAAGGTGTACGAGGCTCCCGCTTA GTGGGGTTAGATGTAGTTGGCTCTGACTGTTTTCGGGATTTGAACTTATATCATCTGTATTACATGACAAACAACTTTAACATTATACCAAAACTCAAAT TCTGTTGCTTCATGTGTCATGTCCTTGTGATCGCTCTAAAATTTAATTAAAAATTAAATTTTAACTTAAATATATTATTTTTTCAACCAATTACAAAGTA TGACACATGAAGTGACACCAAGTGTGAGACAACATATGTGATGTGCACCCGTAAATGTACGAATGTACGGGTGGCCCATTGGGGTTGGACGTACATGATT ATTTCTAGGATTTGAACTTGTAATATAATACTAGTCACTAAGTAGATTATTTTTAGCGTGTAATATCTATACATTGTCATTATAAAGATTTATACGCAGT TAATGCATCATTGAATATTCATTTGTATTACTTTTATTTAAGAGTGAAAAATGATTAAATATAGATGTTGGATGACGATAATGCAGTGACAGTGACAGTA GAAAACTTTAACATTGTCGATGCGTATATTTTTTTCTCTTATTTTAATGTTATGGTTGTTTATAATTAGGTGTATGATCCATTTTAATAAATCCAATAAT TTAAGAAAGGGTTTTTGGCCTTCTTGAATGTTGATATATGCTATAGTAAAATGACCTTGAAATAAGTGCTGCTAGGCTTCTACACAAGTTGGTGCTGCTG GATCTGAACCCCCAATTGCAGACAGAGTTTCAGAATTCAAAGATGCATGCTGGAGATTTTTAAGGCCACATACTATACGTGGTACAGCACTCGGTTCTAC AGCTTTAGTTGCAAGAGCATTGATCGAAAACCCAAGTCTGATAAAGTGGTCTCTCTTGTTGAAAGCATTATCTGGTCTTTTTGCCCTGATATGTGGGAAT GGTTATATAGTTGGCATCAATCAAATCTATGACATTAGCATTGACAAGGTAAACAAACCTTATTTACCTATAGCTGCTGGAGATCTTTCAGTCCAATCTG CATGGCTATTGATTACATTTTTCGCTGCTGCTGGCCTAGTGACCGTTGGATTGAATTTTGGGCCCTTTATCTTCTCGCTTTACACACTTGGCCTTTTTCT CGGGACCATATATTCTGTTCCGCCATTGAGAATGAAACGTTTTCCTGTTGCAGCATTTCTTATTATTGCTACGGTGCGGGGCTTCCTACTTAACTTTGGT GTGTACTATGCCACTAGAGCTTCCCTTGGACTTGCATTTGAGTGGAGCTCACCTGTGGTTTTCATCACTACATTTGTTACATTGTTTGCATTGGTAATAG CAATAACAAAAGATCTTCCGGATGTTGAGGGCGACCTCAAGTACCAGATATCAACCTTTGCTACAAAGCTTGGAGTTCGGAACATTGCCTTCCTTGGTTC TGGAATCCTGGTGATGAACTATGTTTTTTCCATATTAGCAGCTATTTATATGCCCCAGGCTTTCAGGCAATGGTTACTGATACCAGCTCATATGATTTTT GCATTAAGCTTGATTTTCCAGGCACGGGTATTGGAACAAGCAAATTATACCAAGGAAGCAATTTCAGGGTTCTACCGATTTATATGGAATCTGTTCTATG CTGAGTATGCCATATTTCCTTTCATCTAGCAAACCACACATCATTTTTCTAAGATGAGAGGTTCATGTTCATTTATAGAGATCTTCAACTTGTAAACAAC TAGTCATTTTTGCTTCAGTAAGTATTGTACATTGTTTATGACTACACTTCCTTGTGATTAGATGTAATTCTCGTGGTGATGCATGCCAATGGAAAATATT TCAATGCACCATTTTTAAATATCTCTTTGCATGTGTTAGGACATAGGAACCTGG
• Tissue: pods
• Gene name: LI_gene_136808;
• Additional information: details;

Expression of Ll_transcript_425476

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.5
• PS2: 1
• PS3: 1.6
• PW1: 0.6
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_425476

• Blastp: Homogentisate solanesyltransferase, chloroplastic from Arabidopsis with 80% of identity
• Blastx: Homogentisate solanesyltransferase, chloroplastic from Arabidopsis with 81.39% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT3G11945)
• CantataDB: Link to cantataDB annotations (CNT0001184)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444163.1)
• Pfam: UbiA prenyltransferase family (PF01040.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;