| Id Trinity | TRINITY_DN43916_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_425479 |
| Sequence | CCAATGTCGGTGTTGCTATCATGCTCTTCTCCATTCTCACTTCTGAAAACATCACCACCCACTCACTCTTTTCCCAAACCTTCTTCTCTTTCCTTCTTCA GATTTTCTCCACCTTCCCTTTCTCTTCACTCCACTCCTTCTAACACTTCCATTTCAATCAGGGTCTGTCTCTTTCTCTTTTCATTTTCCACTTTTCTATT ACCTTTTTTTGTTAATCAATTTTATATTAGAAACAGACCCAACACTCCATTTTAGATTAAATTGTATGTAATGCACTAAGGTGTACGAGGCTCCCGCTTA GTGGGGTTAGATGTAGTTGGCTCTGACTGTTTTCGGGATTTGAACTTATATCATCTGTATTACATGACAAACAACTTTAACATTATACCAAAACTCAAAT TCTGTTGCTTCATGTGTCATGTCCTTGTGATCGCTCTAAAATTTAATTAAAAATTAAATTTTAACTTAAATATATTATTTTTTCAACCAATTACAAAGTA TGACACATGAAGTGACACCAAGTGTGAGACAACATATGTGATGTGCACCCGTAAATGTACGAATGTACGGGTGGCCCATTGGGGTTGGACGTACATGATT ATTTCTAGGATTTGAACTTGTAATATAATACTAGTCACTAAGTAGATTATTTTTAGCGTGTAATATCTATACATTGTCATTATAAAGATTTATACGCAGT TAATGCATCATTGAATATTCATTTGTATTACTTTTATTTAAGAGTGAAAAATGATTAAATATAGATGTTGGATGACGATAATGCAGTGACAGTGACAGTA GAAAACTTTAACATTGTCGATGCGTATATTTTTTTCTCTTATTTTAATGTTATGGTTGTTTATAATTAGGTGTATGATCCATTTTAATAAATCCAATAAT TTAAGAAAGGGTTTTTGGCCTTCTTGAATGTTGATATATGCTATAGTAAAATGACCTTGAAATAAGTGCTGCTAGGCTTCTACACAAGTTGGTGCTGCTG GATCTGAACCCCCAATTGCAGACAGAGTTTCAGAATTCAAAGATGCATGCTGGAGATTTTTAAGGCCACATACTATACGTGGTACAGCACTCGGTTCTAC AGCTTTAGTTGCAAGAGCATTGATCGAAAACCCAAGTCTGATAAAGTGGTCTCTCTTGTTGAAAGCATTATCTGGTCTTTTTGCCCTGATATGTGGGAAT GGTTATATAGTTGGCATCAATCAAATCTATGACATTAGCATTGACAAGGTAAACAAACCTTATTTACCTATAGCTGCTGGAGATCTTTCAGTCCAATCTG CATGGCTATTGATTACATTTTTCGCTGCTGCTGGCCTAGTGACCGTTGGATTGAATTTTGGGCCCTTTATCTTCTCGCTTTACACACTTGGCCTTTTTCT CGGGACCATATATTCTGTTCCGCCATTGAGAATGAAACGTTTTCCTGTTGCAGCATTTCTTATTATTGCTACGGTGCGGGGCTTCCTACTTAACTTTGGT GTGTACTATGCCACTAGAGCTTCCCTTGGACTTGCATTTGAGTGGAGCTCACCTGTGGTTTTCATCACTACATTTGTTACATTGTTTGCATTGGTAATAG CAATAACAAAAGATCTTCCGGATGTTGAGGGCGACCTCAAGTACCAGATATCAACCTTTGCTACAAAGCTTGGAGTTCGGAACATTGCCTTCCTTGGTTC TGGAATCCTGGTGATGAACTATGTTTTTTCCATATTAGCAGCTATTTATATGCCCCAGGCTTTCAGGCAATGGTTACTGATACCAGCTCATATGATTTTT GCATTAAGCTTGATTTTCCAGGCACGGGTATTGGAACAAGCAAATTATACCAAGGTAACATACTGCCTCCTACTGCAGCAAAATAGTGCAGTAACTCTTT CACTGGTTTCATAATATTTATAAACTAATACAAAAGATTAAAAAAACTCAGGTTGACCTTGATTTTATCTTTCATATCAAAATTTAAGATGATATTGATC ATTCAATTTGGTTATCAGTAGCATAGACCTCATGTCACGGTAGTCATTTTTCTAGTTCCATTTCAACTTATTGGTTGGTTAAATTTTCCCAATATTGCAC AAAGGGAAGAGGCCAATAGATACAAATGCTGTGCAAGTTACTTTTATTATATGAGTCCTTGTTTTTCTAGTTCTGATTTTCCCTTTCATTGCATGGAGAC CAAAGTTTTGTCAATCAATTCAGCGTTTAATTTCGGTAGATGGCAAAAAAGAGTAAGCATTTAAAATAGAAATATTCAGACACTGACATCACTGACTGAT AATGTTCGACAAATGTTGCAGGAAGCAATTTCAGGGTTCTACCGATTTATATGGAATCTGTTCTATGCTGAGTATGCCATATTTCCTTTCATCTAGCAAA CCACACATCATTTTTCTAAGATGAGAGGTTCATGTTCATTTATAGAGATCTTCAACTTGTAAACAACTAGTCATTTTTGCTTCAGTAAGTATTGTACATT GTTTATGACTACACTTCCTTGTGATTAGATGTAATTCTCGTGGTGATGCATGCCAATGGAAAATATTTCAATGCACCATTTTTAAATATCTCTTTGCATG TGTTAGGACATAGGAACCTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_136808; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_425479
| Blastp | Homogentisate solanesyltransferase, chloroplastic from Arabidopsis with 79.43% of identity |
|---|---|
| Blastx | Homogentisate solanesyltransferase, chloroplastic from Arabidopsis with 81.23% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT3G11945) |
| CantataDB | Link to cantataDB annotations (CNT0001184) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444163.1) |
| Pfam | UbiA prenyltransferase family (PF01040.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |