| Id Trinity | TRINITY_DN43994_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_425272 |
| Sequence | GGATTACATATAAAGAAGTGTATGGGTTAGGTTGGGTCTGCTTTGTTTTAAAACAGAAAGAGTAGCTTCTACTGCTTCTGCTTCTTCTACTTCAACATCT ACACTCTATTCTTGTCCTTTCATTCTCTTCTTATATATTAAGATAAAACCATTCTCTCTTCTCCCATTGAAGGAACAAAAAAAGAATCTTGAAGATCGAA AGGGTTATCGTTGTCATTTCCTTTGCTGATTTGTTTGTTTGGTGCAAAATAAGAAAATGGAGAACAGAAACACACCAGTGAGAAAACCACACACTTCAAC AGCAGATCTACTTACTTGGTCTGAAACTCCAATCTCTGATTCACCACTTCCTCATTCCTCTGCTTCTCGTTCTTCACTTCGTTCCCATCAGCCGTCGGAT GGGATCAGTAAGGTGGTGTTTGGGGGCCAGGTTACTGATGAAGAGGTTGAAAGCTTAAACAAACGTAAGCCGTGTTCGGAGTATAAGATGAAGGAGATAA CTGGTAGTGGAATTTTTGTTGCCAATGGAGAAGATGAAACATCGGAAGCTGGCAGTGCCAATCCTGGATCAAATAAAACAGGACTGAGGATGTATCAGCA AGCAATTGCCGGAATCAGTCATATCTCCTTTGGTGAGGAGGATAGTGTTTCTCCGAAAAAGCCCTCTACTATTTCTGAGGTTGCAAAGCAGCGTGAGCTA AGTGGAACTCTGGAAAGTGAGGACTCTAAGTTGAAAAAACTGCTTTCTGATGCAAAGTGCAAGGAGCTTAGCGGTCATGACATATTTGCTCCACCACCAG AAATCAAACCTAACCCAATAACTCCTCGTATACTTGAGTTGAAAGGAAGCATAGACATTGGAGTACCCACTCAACCTGAGGCTGATGAAGAGCAAGGTGA TTTGAAGTCTACTGGGGAACCTTTGAAGACAGCAAAGAAGATATATAATAAGAAATTTGCAGAACTTTCAGGAAATAACATATTCAAGGGTGATGCACCA CCTTCATCAACTGAAAAATCATTGAGTGGAGCTAAACTACGAGAGATGAGTGGCAGTAACATCTTTGCTGATGGGAAGGTAGAATCAAGGGACTACCTTG GTGGAGTTCGAAAGCCACCAGGTGGTGAAAGCAGCATTGCTTTGGTATAATTGATTGATTAGGTCTAACTCAGTTATTTTCACACTGTTCTTGTTTTATT TTGATTAATTTTTAGTGGGGATGTGTTATATACTATTTGACCTTAAATTATGGGTTTTTGGGACTTCCTTGTTTTAGATTTGTTGATGATTTCTTGACCA AAATGGACCATATGCTAATTGGTTTTATGTCCATAATCCTGTGGTTGCATTCGTGTTTGCTTTTAATGAAGTGACTTGGACTGTATACCCAATCTAGTAT TTTATTACTTGCACTACAGTCTACACTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_136928; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_425272
| Blastp | DNA oxidative demethylase ALKBH2 from Arabidopsis with 52.73% of identity |
|---|---|
| Blastx | - |
| Eggnog | Alkylated DNA repair protein(COG3145) |
| Kegg | Link to kegg annotations (AT2G22260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417267.1) |
| Pfam | Protein of unknown function (DUF4057) (PF13266.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |