| Id Trinity | TRINITY_DN44022_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_504134 |
| Sequence | TTGCAGGTGATATGAACATCATCATGCAGAACTTAACTGAGTGAGTAAGACCCCTTGTGGGTCTCAATGGATGGGACTATTGTGTGTACTGGAAATTGAG TGAAGACCAAAGATATGTTGAGTGGTTGGGATGCTGTTGTGGTGGCACTGAAAACAATAATCAAAATGATGGGGAACAACACCTTTTCCCTTTCTCTTCA GTGACTTCTTCATGCAGGGATACCATGTTTCCACACCCTAGAATGAAAACATGTGATCTTCTTTCCCAACTTCCCATTTCCATACCCTTGGACTCTGGGA TTCATGCACAGACCCTATTGACAAACCAACCCAGTTGGGTGAATTATTCCAAAAGCTTGGATTCAAACATTTTGGAAGAAACAATTGGGACCAAGGTTCT AATTCCGGTGCCAGGTGGACTAATTGAACTGTTTGTGACTAAACAAGTGCCTGAAGATCTTCAAGTAATAGATTTCATTACAACACAGTGCATTGTATTG GTGGAGCAAGAAACAGTGAACAACCATTCAATGAGCTTCAACATTGACGTAAACTCAATAAGCAACAACAACAACAACATGCAATCAAATCATCAACTTG TAAGCGATGAGAATGAAGGCAATAACAATCACAGGAACAACAATCACTCTTTCCCTCTCACAACAACAACAACAGCATCACCAGACACTTCAAGTCTCCC ACATGACATATCTCTAGACCGCATAGGTTTATGTAATTCTTCCCTCAACTTCATGCACCACCACCAATTCAATTACAATAACCAAGGTTCCTTCCTTCAT GACAATAATCAAACGAATAATAATGATGAATGCATGAATATGAATGATCATGCACAAGACATGCAACAATATTTTGAACCTTTGGACACAAAGGATCATA AGCAAGGCCAAAAAGGATCAGATTCAATGTCAGATTGTAGTGACCAGAATGAAGAAGAGGACGATGGGAAATATAGGAGGAGGAATGGGAAAGGAAACCA ATCCAAGAACCTTGTAGCTGAGAGGAAGAGAAGGAAGAAATTGAATGATAGGTTGTATAACCTTCGTTCTTTGGTGCCAAGAATCTCTAAGCTAGATAGG GCTTCAATTCTGGGTGATGCCATTGAGTATGTGAAAGATTTGCAGAAGCAAGTGAAGGAGCTTCAAGATGAGCTTGAGGAAAATTCAGACACTGGAGCTG ATAGCAACTGCTTCAATAATAATAATCATGTGGTGGGTGTGAAACAAACAGATAATCTTAATGGAGCTGAAATTGGACCCAAAGAACCTGAACATTGTAA GACCAAAAATGGGTTTCATGTGGGGACTTCAGGGAATGGATATATCACAAAGCAAAAACAGGAAGTGGATGCTTCTACTATGGACAAGCAGACTCAGCAG ATGGAGCCTCAGGTAGAAGTGGCTCATATAGATGGGAATGAGTACTTTGTGAAGGTGTTCTCCGAGCATAGGCTGGGTGGATTTGTGAAATTGATGGAGG CATTGAACACTCTAGGAATGGATGTTGTACATGCTACTGTCACCAGCCACAAAGGCCTAGTCTCTAATGTTTTTAAAGTGGAGAAAAAGGACAGTGAAAT GGTTGAGGCTGAAGATGTGAGAGAGTCACTCCTAGAACTTACAAGGAACCCATGTAAAGGATGGAATCATGAGATGACAGAAACATCAGAAAATGGTGTA GCAAGGGATCAAAATCAACTCCATAACAACCAGATGGGTGCTTATCACCCCCATCAATATCATACTTAAACTTTCAGGCACTGTTCTTTCATAATTAAGC AGTGTTACGTTGTTGAACAGTTTTTTTTAAATCTTGAATTGATACTTGGGGATGCATAATTAATGTTAGAACAATCGTTCATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_136970; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504134
| Blastp | Transcription factor ABORTED MICROSPORES from Arabidopsis with 43.55% of identity |
|---|---|
| Blastx | Transcription factor ABORTED MICROSPORES from Arabidopsis with 55.69% of identity |
| Eggnog | transcription factor ABORTED(ENOG410YFZF) |
| Kegg | Link to kegg annotations (AT2G16910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432464.1) |
| Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal (PF14215.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |