| Id Trinity | TRINITY_DN44040_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_504470 |
| Sequence | ACTATTTGATTTTTATAATGATATAACATTAGATTAATCTCTTGTTGATGCAGCCTCATTTATTGGATGTGATGAATTTCTTTGTTGAAATAAATTTATA AATCTCATCTAGGGCTTGTAGAAATAGAATTGTACAAAACAAAATATAATAATAGCAGAATTGGACACGTGTAGAGCAGAGAAAGGACCTTGTTATTGTT GCTTAAGTTGAATGTTGAAGGTGAAGCTTTAATGGCCATAGCTATTCGCAGTATATCTCTTGCTTTGAAAAGGTTCAGTCAGGTTCAGCCTCCAAATCCG GTTCGGAAAAACAAAGCTTTTTTCTGCAAGATGTCGAACGAGTCAACGCCCTTGACTCACTCTATCACGCTACCGAGTCAACCTTCCCAACCCGTTCACG TTGTTGCTTCCCCTGGTGTCTCTCATTCTGATTTCTGGAGTGCTATTGGTTCATCGTTATTCAAGCAATGGTTACATAACTTGGAAACTGAGACTGGCAT TCTAACCGATGGCACCATGACTTTGAGGCAAGTTTTAATTCAGGGAGTAGACATGTTCGGAAGGCGCATTGGGTTTCTCAAGTTCAAGGCTGATATTATT GACAAAGGAACAGGGAATAAGGTAAGAAATAATTTACATTAATGCTTTTTGATGCAAGTCTATGTTGACCATGTTTCTTTAGTGTGTGTCTGTGTGAATT AAAGCAATGAGCTAAGAATCAGTATGCAGTCTTTTCCTCTATACCTCTTCTCCATATATCATTTAAACAATATAGTTGGAGGGTGGAGTTGTTTCATTCT TTTCCTTGTTGAGCTGTAATGTAATATCTGAAGATTGGATTGCTCACCTTGAAAGTAAAACTTAGGACACATTTGATTCACATGTATCTCACATTCTAAT GCATCTTGGATATAAGATGCATTAGGATTCCCACATTTGGAACAACAATCACCTAACATTGTCAAGCGCTGTGATGCCTCTCAATTGCACTTAGCAATCT TAGATATCCAATTGAGAGGTTATCATATGTTCAAAAAAGTATCATATTCCACATGCATTTTGCATTTGATAAGTGAAGAATTTGAGATGCCCATGGTATT TTCATACCCATGTATCGAAGGTAGACATCATTATGAAGAGTCCAGGATGCTCGGATATGTTAAATGACTGTGTACCAAATCTCACTGTTTGGTATTGTAT TTAGTGTACTTGATGCTTATTTCTTTCTTTTTATAATAAAGTAAACCATTTTAGATACTTAGATTCCAGGTATTGTTTTTGCAAGAGGACCGGCTGTAGC TGTGCTGATACTTTTGGAATCAGAGGGTGAGACTTATGCCGTTCTTACTGAACAGGCAAGGGTTCCTGTTGGAAGAATTATTTTGGAATTGCCTGCTGGA ATGTTGGACGATGACAAGGGTGATTTTGTTGGCACTGCAGTTCGTGAGGTTGAAGAAGAGACTGGCATAAAATTAAGTCTAGAAGATATGATTGACCTGA CTGCCTTCTTGGATTCTTCAACCGGACGCAGAGTGATCCCTTCTCCGGGAGGATGCGATGAAGAACTCAGTATCTTTCTATACAGAGGGCGTGTGGATAA AGAGATTATAACACAGTTACAGGGAAAACAAACTGGTCTTATCAAACATGGGGAGCTGATTAAGGTTCATGTAGTGCCATACAAAAAGCTTTGGCGCACT ACGGCAGATTCGAAGGTTTTGATGGCTATCGCACTGTTAGAAATGGCTATGAAAGAAGGCCTACTGCCTCCTTTTGCAACCTAACTTTGTAACCTTTCTG TCCGGTTGTTCTACACAGAGGAAACAATGCATACCTCTGGACAAATGAATTTGCTCTGAATCTTATTGGGATTTCAATTTTTCATGAAGTGTAATGTCGA TTGATCCGTGTAGCCACCTATTATCTACTAAGATTAAGGTTGGTTGTTATTGTTCCCGTTTGTACTGTCCTGGTTAGAACTTGGAGCTGTGTCTATGAAG AGATTCTTTTGTATGACAGTGTGCTGTTGAAACTTGAAAGTCAGTTACACAAGTCACCAATTTCTTTCATGCTTATCACCATTTTTATAATGTTAATCTA AAGAAAATAGAATTCCATATCTATGTATATGTGTATCAAACATGGCTAACACTTGGTGGAATATCTTTGTAAAAAGTTATATTATTATTTGGATCCCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_136997; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504470
| Blastp | Nudix hydrolase 14, chloroplastic from Arabidopsis with 74.59% of identity |
|---|---|
| Blastx | Nudix hydrolase 14, chloroplastic from Arabidopsis with 77.98% of identity |
| Eggnog | Nudix hydrolase(COG0494) |
| Kegg | Link to kegg annotations (AT4G11980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446628.1) |
| Pfam | NUDIX domain (PF00293.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |