Ll_transcript_504446

• Id Trinity: TRINITY_DN44066_c0_g1_i1
• Name Transcript: Ll_transcript_504446
• Sequence: CTAAAATAAACATTCCATAACTTGCTTAGTTGCTTATAGACTGTAGTATCTAGTTTCCTAACTCACCCCTTCATTTGAGTCCCTCACAGCCTCACTGAAC TTCGCAGCTTATCGTTTCTTCAATTACTCTTTTACCCTCTTCTTTCCCTTATTCTGCAACAAAAACAGTTTCTAGGGTTTATAACAAAGAACCCTAAACT CAGAACGTGATTTCGTTTCTCAAACCCTAATTTCCCCACGCGATGACGAGGGTGTACGGAACCGGGACCTACGATTTCCGGCGTCACAGAGTGGCGGAGT ACCCGCTGGAATCGAAAGCGGTGGAGTTGAGTCAAAAGCCTGGTGGCGGCGGCGGTATTTCAAGCACAATCACTCTCTCGGAGATCCAGCGCGACCGAAT CACGAAGATTGCGGAGGCGAATTGGTTGAAAACCGCTGACGCTGCCACGGAGGCGGAGAAGAATCCGTTCGATGCGGAACTTGTGAAGAAAATTTATGAA ACGGAGTTGGTGGTGAAAGAGGGACAGAAACCTGTTCCTTTGCAGAGGGTTATGATTTTGGAGGTTAGTCAGTATTTGGAGAATTATCTTTGGCCTAATT TCGATCCTCAGAGTGCTACGTTCGAGCATGTTATGTCCATTATCCTCATGGTTAATGAGAAGTTTCGAGAGAATGTTGCAGCTTGGGGTTGCTTCTATGA CAGGAAGGATGTTTTCAAAGGGTTTCTTGAGAGAGTTCTTCGGCTAAAGGAGGGAAGAGAATTAAGTATAGCAGAGAAGACAAATTACCTAGTTTTCATG ATAAATGCCTTTCAGAGTTTGGAAGATGAAGTTGTTAGCATGACGGTTTTGAGACTGGCCAGTTTGAAATCCTGGTACAGTTTGTCTTATGGTCGTTTTC AGATGGAGCTTTGTCTTAATCCTGGTTTGATCAAGAAATGGAAAAGGATGGCAAGGAAGGAATCCGTGAAAGGAGGACAGCATTTAGATCCCTCAACTAC ACCCGAAGTTACGTTCTTGAGGAACCTCATAGAAGAATTTCTGGAGATACTTAATTCACAGGTATTTCCACGAAGACAATTATCTGGTGAAGATGATGAA CTTATTGATGCTTCTGGTTTGGGGCTAGCTAATGATGCTTGTATCCTCTATTGTGAGAGGTTTATGGAGTTTCTTATTGACCTCTTGAGTCAATTGCCAA CGAGGAGGTATTTAAGGCCTCTTGTGGCTGATGTAGCTGTAGTTGCCAAGTGTCATTTGAGTACACTCTATCGGCATGAAAAGGGGAAACTTTTTGCCCA GTTGGTTGATTTATTACAATTCTATGAAGGATTTGAGATTAATGATCATACTGGCACACAATTAACAGATCATGAGGTTCTTGAATTTCATTACAGTCGT CTGCAGTCATTCCAGCTACATGTATTTAAAAAGATGGACAAGCTGCGGGAGCTTGCTTTGACTAACATTGGTTCAATTCACAAGCGTGCAGATCTATCCA AGAAATTATCTGTTTTTTCTCCTGAGGATTTAAGGGATTTGGTTTGCTGTAAGCTCAAATTGGTCTCTAAGGAAGATCCCTGGTCAGAGAGGGTTGATTT TCTTATTGAAGTGATGGTGTCCTTTTTTGAGAAGCAACAATCTCAAAAAGAAGCAATCAATGCTCTTCCTCTTTACCCAAATGAGCAAATTATGTGGGAT GAAAGTGTTGTACCAAGTATAAATTACTCTGGAGAAGGTTGCTTGGCATTGCCAAAGCTTAACTTACAGTTCTTAACACTTCATGATTATCTTCTTCGAA ATTTTAACCTATTTCGACTTGAATCAACGTACGAGATACGCGAGGACATTCAAGAGGCCATTCCACATCTTCTTGCATATATTAATAATGATGGAGAAAC TGCTTTTCGGGGTTGGTCAAGAATGGGTGTACCCATTAAAGAATTCAAGATCAGTGAAGTAAAGCAGCCCAACATAGGAGAAGTCAAGCCATCATCTGTT ACTGCGGAAGTTACTTTTAGCATTTCAAGCTATAGAGCACAGATTAGATCAGAATGGAACGCACTCAAGGAACATGATGTATTGTTTTTGCTGTCTATTC GTCCGTCATTTGAGCCTCTTAGTGCAGAAGAAGAAGGCAAAGCTAGTGTCCCACAGAAGCTTGGCCTACAATATGTACGGGGATGTGAAATTATTGAGAT TCGTGATGAAGAAGGAACCCTTATGAATGATTTTTCCGGAAAAATTAAACGGGATGAGTGGAAGCCACCGAAGGGGGATTTGAGAACAATCACTGTGGCT TTGGATACAGCACAATACCACATGGATGTCACTAATATTGCAGAGAAGGGAGGAGAAGATGTGTATGGTACATTTAATGTGTTGATGAGGAGGAAGCCAA AAGAAAACAATTTTAAAGCAATCTTAGAATCAATAAGGGATTTAATGAATGAATACTGTATTGTTCCTAAGTGGTTGGAGAACATTTTTCTAGGTTATGG AGACCCTTCGGCAGCACAATGGACTAATATGCCTGATCTTTTGGAAACAGTAGATTTCAAAGATACTTTCATAGACGCAGATCATTTGAAAGGAAGTTTT GTGGATTATGAGGTTTCTTTTGTCAATCCTGATGGCACAGAAAACTTGAATCCTAGGCCTCCTTTTAAGATCAAGCTTCCCCGAATGCTCAAGGGAAGTG GTGGTGCTCTTGATGGGAGTGCAGTGTCTACTGCCGGTGCAGTAAATGGTATAAGTGTGGTTGATGGTAATCATCAGAAAGAAAGACTAATTATTGAGAC ATATACTCCTCCTGACCCTGGACCTTATCCTCAAGATCAGCCAAAACAGAATATAGTTAGATTTACATCCACACAGGTTGAAGCAATCATCTCAGGTATT CAGCCTGGCCTAACCATGGTTGTGGGGCCACCTGGTACAGGAAAGACTGATACAGCTGTACAAATTCTCAATGTTCTCTATCATAATTGTCCTTCACAGA GAACCTTGATAATTACTCATTCCAATCAAGCTCTGAACGACCTGTTTGAGAAGATAATGCAGAGAGATGTACCTGCACGTTATCTACTTCGACTTGGTCA AGGAGAACAAGAGCTAGCAACTGATCTTGATTTTAGTCGGCAAGGTCGTGTTAATGCAATGCTTGTTAGACGGTTAGAGTTGCTGAGTGAAGTGGCGAGG CTAGCAATGTCTCTTCAATTGCCAGAGGATGTTGGTTATACTTGTGAAACTGCAGGATACTTTTGGTTGCTTCATGTCTATTCACGCTGGGAGCAATTTC TTGCTGCTTGTGCTGAGAACAAAGATAAGCCAACATTCGTCCGGGACCGTTTTCCCTTCAAGGAGTTCTTCTCTGACACTCCACATCCTGTATTTACAGG CGAGTCTTTTGAGAAAGACATGCGGGCTGCTATGGGGTGCTTTCGTCATCTGAAGACTATGTTTCAAGAACTGGAAGAGTGTCGGGCATTTGAATTACTT AAGTCAACAGCTGATAGGGCTAACTACTTAATGACCAAGCAGGCTAAGATTGTAGCTATGACTTGTACTCATGCAGCTCTTAAGAGGAAAGATTTCCTTC AGTTAGGTTTTAAGTATGACAACTTGTTGATGGAAGAAAGTGCCCAAATTTTAGAAATTGAGACTTTCATTCCAATGTTACTCCAAAGGCAGGAAGATGG TCATGCACGTCTTAAACGCTGCATTCTGATTGGTGATCATCACCAGTTGCCTCCTGTTGTAAAGAACATGGCTTTCCAAAAGTACAGTCACATGGATCAG AGTCTATTTACAAGGTTTGTCCGTTTGGGCATTCCTTACATTGAGCTGAATGCCCAGGGAAGAGCCAGGCCAAGTATAGCTAAGCTTTACAATTGGAGAT ACAGAAATTTGGGAGACCTTCCTTATGTAAAGGAGGCATCTGTATTTCATAAGGCAAATGCTGGATTTGCTTATGATTATCAGTTAGTGGATGTTCCAGA CTACCTTGGTAAAGGTGAGACAACTCCATCCCCTTGGTTTTACCAAAATGAGGGAGAAGCAGAATACATTGTCAGCGTCTATATATACATGCGTTTGTTA GGGTATCCTGCAAATAAGATATCAATATTGACTACATACAATGGCCAGAAACTTCTGATCCGTGATATTATAAATAGGAGGTGTGTTCCATATGACTTCA TTGGTCCACCAAGCAAGGTTGCTACAGTTGATAAGTTTCAAGGTCAGCAAAATGATTTTATATTGCTGTCTCTTGTGCGTACCCGATTTGTTGGCCATCT ACGTGATGTAAGAAGATTGGTGGTTGCCATGTCACGTGCTCGACTAGGTTTATATGTATTTTGCCGTCGTTCTCTTTTTGAGCAATGCTATGAGCTGCAG CCTACATTTCAGCTTCTTCTCAAGAGACCTGACCATCTTGCACTTAATATGAGTGAGATTACATCATATACTGAACGAGGTGTTGAAGATTCTGAACCTA GAGATCATATATATCTTGTTAGTGGCATTGAGGAGATGAGTAGTATCATAGACAGGCTGTATCAGGAAAAGTCGAGACATCAATCTGTGCAAAATGGGTC TTATTTTAGTCACTCGGCGCCATCATTAAATACAGATGTGGTGCAAAGCCAGCAGCAGACTGTGGCCAATAGCATGCCTGAACAAGCAGATGATATGGAC ATTCCAGATGATAGCGATGGGGCTGAAAAAGTTGATAACCATATTGCTGGAGATTTGCCACGGGAAAGCAACATAGAGGATGTTACAATGGTTGACAGTA GTGCCAGTGTTCCAAATGGGAGCCCAACGCCATAGAAGCTCTTCAAATTGGTATTATAGTTAGGTTTTGACCTGCCTAAAGGTATGCAAACTAGTACTGC CCACTATATGTAAACATTCATTCCACCCTTTTTAAATTCCTGTGCCACTATCCTTAGGTTTTGGGGTTGGTTTACAAGTATCAATAGCAAAAATGTTTTG GATTTCTAATGTAAAACTCGGCTGAAGGATTTCATCTCATGTGTTAAAAGCAGGAGTAAGTACACGGTATGATTTGTGGGTTTTTGGTGGGTGCAAATGG TTGGAGGAAGCAGTGTCAAATTAGATATTTCATAATTGAAAACTCAATGTTATGTATCTTTGACCAATGGGGAAATCAAAGAAATTTTCTGATCATATAT TATGTTGTACATTACTAACAACCTAACAATGAGTAGTATTTTCTGGAA
• Tissue: pods
• Gene name: LI_gene_137041;
• Additional information: details;

Expression of Ll_transcript_504446

FPKM

• PAB: 2.5
• PNAB: 14
• PS1: 15.1
• PS2: 9.5
• PS3: 13.3
• PW1: 9.6
• PW2: 9.7
• PW3: 7.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504446

• Blastp: Intron-binding protein aquarius from Homo with 47.88% of identity
• Blastx: Intron-binding protein aquarius from Homo with 47.85% of identity
• Eggnog: Aquarius homolog (Mouse)(ENOG410XPV8)
• Kegg: Link to kegg annotations (9716)
• CantataDB: Link to cantataDB annotations (CNT0002820)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455598.1)
• Pfam: Intron-binding protein aquarius N-terminus (PF16399.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;