Ll_transcript_504174

• Id Trinity: TRINITY_DN44088_c0_g3_i1
• Name Transcript: Ll_transcript_504174
• Sequence: CTCACGGTTTGGTTTAAGCTTGGGAATAGACCTAAATTGCTATCACTTTGCTCATTTACTTGCTATGGGTTTTGATTGATAGATAAATCAGTTATAGATG ATTCTGAATGTTGACATTGTTGTTGTTTTGTGTAGCAGCAGGAGTAGGAGTGCTCACTAACTCTGATGTCCCCCAAGGTCCCTAGCAATGGAAGATTGGA AGTGCCTGCCAGCATTGGCGTCGTAGCCAGATGTAGCATGAAAAAATGGGCCATAACTTATTACACCGACAAGGATGTAGGACTTTTTTTGGGTACATGG TATACTCACCCTTTTTGGGAACAAGTGTGGCTCTTAGAAATGGAACGCCGGAACATATTTGACATTTAATACATGTTGGTACAAGGTAGGACTGGTTTCC CATGAAGGAAACTTCAAAGAGAAATGTTAAGAGGTACATCTACAAACAAGTGTTCACCATGAATTTGCTGAGTTCAAAGATGAACTAGAGAGCATTAAAG CATACCTCAAGGATGCAGATGCAAGGGCTGCAGCTGAAGTAGACACTACTAAAGGGGTAAAGGTTTGGGTGAAGAAGTTGAGAGAATCATCATTTCAAAT AGAAGATGTCATTGATGAATACCTCATCTATGAAGCTAAGCAGACTTATTATTCGCCTGATTGAAACTTCGATAACTCATCATCTTATAGTGTCTCAGAT TCAAGGCCTTAAACTATATGTTCATGGAATCAAAGCAAGAAGTGAAAGGTATAACTTTCATGAGGAAGGATCATCAAGAAAAGATAGAGGGACCCAGCAT TTCAATTGGGATTATCCTCGATTGGGTTCCCTTATCATGGAAGAAGCCAAAGTCGTGGGATTTGAGTACCCAAGGGAGGAATTGGTCCATTGGTTGGTGA ATGGAGAGACATCTCGCACGGTGGTTTCATTTGTTGGCATGGGAGGACTGGGAAAAACCACTCTTGCCAATAATGTTTTTCAGAACAACATGGTGAAAGA TTACTTTACATGTCGTGCTTTTATCACAGTGTCTCAAACATACACAGTGGACTCTTTGTTGAAGGACATGATGAAACAATTTCATAAAGAGAATAACGAT TCGCTTCCTCCGGGTATCAACACAATGGATGGCATGTCGCTTGTGACTGAAGTGAGGAACTACCTGATGATGTATGGAAATAAAGGAAGTAGGATAATGA TCACAACTAGGAACTTGGATGTTGCAAATTATTGTAATAAATCTTCTATTGTTCGAGTGCACCAGTTGCAACCCCTACCTCAAAGCAAAGCATGGGAACT CTTCTGTAAGAAGACGTTTCGATTTAGTTCTAATGGAAATTGTCCATTAGAGCTTGAAAAAACTTCTCATGAAATTGTTCAAAATTGTGAAGGGTTACCA CTTGCAATTGTGGCCATTGGAGGTCTTCTGTCAACCAAAGATAAAACTGTACCTGGGTGGAAAAAACTATGTCAAAATCTTAGTTCACATCTGGCTAGTT TAACTAGAATTTTAGCACTCAGTTACGACGACTTGCCCAACTATTTGAAATCATGTATCTTGTATTTTGGTGTTTACCCAGAAGACAGCTCTATCAGGTG CACCAAAATTATAAGGCAATGGATAGCTGAGGGTTTTGTAATACATGAGAAGAATAAGACTTTAGAAGAAGTTGCTAAAGAATACTTGACAGAGTTAGTC CATAGAAGCTTGGTTCATGTTTCTAAAGTTAATTATAATGGGAAACCTTCGAATTTTCGAATTCACTATTTGTTACACAACATGATGAATAGAAAAATGA AGGACATTGGTTTTTGTCATGTTGTACGATCAAGATGTCTATCATGATCTAATGACTAGACGCTTGTCCATAGCAACCAGTTCCATTGATGTGCTTATGA GCATTAAACAATCGAACATTCGGTCGATGTATATGTTTGAAATAGACAAATTGCCTGAAGAATTTTTGAGTAGATTCTTTGCCAAATCCAAACTTCTAAA AGTATTGGACTTGGAAGGTGCTTCATTGGACTATGTTCCTGATCATTTGAGGAACATTTTCCACCTGAGGTTCTTGACTCTAAGGAAGACAAAGGTTAAA GATCTTCCTAAATCTATCGGCGAACTGCAAAACCTAGAGACGTTGGATTTGAAAGAAACAGCAGTGCATGCTTGCCAAGGGACATATGCAAACTTACAAA ATTACGCCATCTTTTATTTTGCTGTAGAAAGTCAGAAGAATCTAATACGATGAACTACGAAATCGGGATGTGTATGAATAAAGGAGTTGGATGCCTGCAA CTTCTACAAACACTGTATCACGTGGATTTAGACCACGGTGGATTAGACCTCATTAAAGAGCTAAGAATGCTGAGGAAGTTACAGAAGTTGGGCTTGAAGA ATGTTAAGAGAGAATATGGAAAGGCTGTGTGTGACTCAATACAGGAAATGAACCACCTTGAATCTCTTTGTTAGTGGAAAAACAGAAGTTGAAATCATAG ACTTGCGACATATTTCATCCCCCCACAACTTCGTCGACTGGACTTGTTCGCGTGCTTAGAGAAGTTGCCAGATTGGGTTTCAAGGCTCGACCAG
• Tissue: pods
• Gene name: LI_gene_137081;
• Additional information: details;

Expression of Ll_transcript_504174

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.6
• PS2: 0.1
• PS3: 0.2
• PW1: 0.3
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504174

• Blastp: Disease resistance protein RPM1 from Arabidopsis with 32.6% of identity
• Blastx: Disease resistance protein RPM1 from Arabidopsis with 32.51% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT3G07040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438989.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;