Id Trinity | TRINITY_DN44142_c0_g1_i5 |
---|---|
Name Transcript | Ll_transcript_340372 |
Sequence | AGTAAGGAAAAGAGTGATCGACCGAAACGTGTGCTCCATTCCAGAACTTTCCCACTCTCTCATCTCGCGTACTAGATTCTCATCCTCTTTCGTATTGAAA CACCGCACCATTCTTCACACACACACACAGAAAAAACATCATTAACATAAAGAAGATGTTCAAGAAAGTAGTGGAGGCCAAGACTCAGCAGAGATTATCA GGTGCCGATAGAAAAAAACTGAGAAGAAACATTAAAGACAAATTCCCAAGAGCTTCTGATTCTGACTTAGATGCCTTGTTACCTCCTAAGGCAGAGATAA CAGTGGCCAAGTTACAGAACCGAGTGCATGTGTATAGTGTGGAGGGAGGCTATCCAATGTTTTTCGATGTTGATGGCCGTGGCTCTGAAATTTTTCCCTC AGTTTATGCTCTCTGGACAATCCCTGAGCTGTTGCCTGCTTTCATGCTGAAAGGTGGTGAGGTTTCTCCTTTTATTATAGGAGGAGCAGACTTGATGTTC CCAGGTATAAAGGTTCCCCCTGAAGGTCTTCCTTCATTTGTAGCAGGGGAACCATGGGCAGTGAAAGTACCTGGAAATCCTGCTCCGATTGCGGTAAACT GTTTACGTTGGCTGTTTCTGTTCACCACCACTGTCAGATTATATCGTTGATACTTGATAGGCATTCATTGTTAACGTTCCATTCATTCTTATGAAGGTTG GGAGTACCACAATGAGCAGCACTGAAGCATTAAAGGCTGGATTACGTGGAAAAGCATTAAGAATAACTCATTATTATCGTGATCTGCTCTGGGAATCAGT GGAGGGCCATCCTGTGCCTAATGCAGGTTTTTACGAAGATGCTGTGTTTGAAGATCCTTCATTATTATCACTTCCTGAGAATTCTGATTCAACCGAGATT GTTGGCGAGACATCAATTGTTCAACCAAACAATACAGGAAGCATTGAAGTGGATGGATCTCTGGATGTAAATGAGTTACAAGCTGACTCGATCCGTGCAT TGACAATACCGAATGATGAAAATGATACAGCAAGTGCAATAACTGCAGGCGTGGCTGATTTGAAGATACCAGATTCTAGCCCTGCTAATGACCCAAATGA CCAACATAGTCTATCAACTGCAGACATAGATTTGCTGTTAGATAAGTGCCTTCTACAAGCATTGCATACAACAGTGAAGGACAAAGAGCTTCCCATTCCA GGAAGCACATTATGGTGGGATTCACTTCCTCACCCCCCCCATACACACACAAATAAACTTTCGAGTTTGATCACTTTGCTAGACCAAGTTTAACCATAAG AAATAGATTCGCCATAAAATCCAGCAAACCATGAATTTTTGGATGACAATCAGGCTCAGTTTATTGATTTTAAATGATAAATTTGTTTAGTAAGGCAAGT CTTAAATACAAACCAAAATGGGAACTCTATGCAGTGCACTTTTGATTAGATGAGATCTTGCGAACTTTGGTATTGATTTTTCAAGCTCTTGTTTATGCTG ATTGCTGAGCAACAGTGCCTGCATTTGCAGTAAGCTTAAAATTTAGGTTTTGGTTTGCTGTGTCCATCAAATCATTGAACTCCTTTTTTGTCGACCCATA ATAAATGAAATGTTCCTTCTTGCAAATAATTTGCTATTTTATTTATTCATTGAAGGTTGAGGTGTTTAGATGAATTTGTTACTTCAAAATGTCTCCTTTT TTACCCCAAGTAATCAAATAAGTGTTTGTTTGAGTGTTGTAGGTCAAACCATGTATTGCCGTGTAGGCCTCCAGGAACAACTTTAGACATCAAGAAATCA TCCTACAAGAAGTTGTCAAAGTGGTTACATGCAAAATCCTCCTCTGGCTTGCTGTCAGTGAAAGAAGATAAATACAAAAAAGAAGTAATGCTACTTTCTG TAAACCGAAAGCATGCTGATTATGCATCCTTTAAGCCTGAAAGAAGGCCAGTGGAGAAAAGTGAACAGCCCAGTGTTCACTCTGCCAATGAAGTTCGTTC GTCCAAAACTCTTGAAGTGGCTGAAATATACAAGCCAAGTGTACATGTCAATCCCATCTTTTCATCGGTCGGAGCTGACACTGGGAAACTGTATAGTGCT TCTGAAGCTCATGATATTGTCTTTGAATACATTGAAAAACAAAATCTTGTGAAGCCAACAAATAAGTCCATTGTGGTTCTAGATGCAATACTATGTGATG CACTGTTCAAGGGGGTTATTAAAAAAGGAACAACATATCCTACAGAAATTCACAAGAAAGATCTAGGAACAGCATTTGTGAGCCGTATGCAGCCTCATCA TGTTGTCACAAGAGGAAATGAATCTATGGTTCGCAAAGGTGGACTTAAACCAATTCAGTTATTGACAGAACGGAGGCAAGGCAACAAGAAGGTAACCAAA CTCTCCGGTATAGAAAGCTTTCTTATGGATGCCGATGCACTAGCATCAGAACTGCAGAAAAAGTTCGCTTGCAGTACCACTGTTGGAGAGCTACCAGGTA TTTCTTGGTCACTCCAAACTGAAAGCTGTATATTGGTTTGTGCTTGTTACATTCAAGAAATACATGATTGGTTCATTTTTATTCATCAATGTTACGTTAC GAATGGTCAGGGACACTAAGCCGTTCCAACCTTCAGGATTGTGACTTGTAAAGTTTGTTTTCCTAGTTGTATACTTGTATCTAATAAAATGAAATGTGGT TATTACACTTACATATCTGGGATATGAAAATATGTGCTTGCAGGTAAGAAAGGGCACGAAGTTCTGATTCAAGGAGGAGTTATTGATGACTTGGCAAAAC ATTTGATTGAACAATATGGAGTTCCAAAGAGATACATTGAAGTTCTTGACAAAACCAGGAAATGAGCTCCTTAAAGTTGTTGGAAACAATCATGATAATG TTTCAGCTGGATGTCAGGAAATGTGTGAATTTTTGTACTTTTCATACACTGATATTTTCCAGTTTTGTAAACTGAGTTATTTCTTTAGATAACTAAAATA ATTAGTCAGGGATTTGTTGTCATTTTAAATTATGACTTTAATGACTAATGAGAATTTGATTTATTGTCTAATAGTGCTATTGGGTTCATACAAAAATTAT TTGAACATAGGAGGAGAAAGTAACAATAGGAATGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_137184; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_340372
Blastp | Eukaryotic translation initiation factor 2D from Oryctolagus with 26.16% of identity |
---|---|
Blastx | Eukaryotic translation initiation factor 2D from Rattus with 39.74% of identity |
Eggnog | translation Initiation Factor(ENOG410XSAV) |
Kegg | Link to kegg annotations (100345187) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449555.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |