| Id Trinity | TRINITY_DN44161_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_339992 |
| Sequence | GATTAATAAACACTTGTAAGGTATATGTTGCAGCTGTGTGTCTTCGGTATCTGTTAAACCCTAAACCTCTTACAACTCTTTCTTCCACCGTGAGTCCTTC TACGTTTCCAATCTCCGCGCCGTTATATTGTTTTTACGGTGCCCTTTCCTATCGTCAATGGAGTTTCCCTTGGTAAATGATGATGCAAATATTGATAGTG AAACTGAAGATTTGAATGAGGAGATGTCACCATCTGAATCAGAAGAAGAAGTGAAATTAAGTGAACCATCTGAAAATGCTATCAATAACAGAGATGCTAT ATTGGATAAACTTGGAGACATAAGTTGGCCAGAGAATGTGGATTGGATACACAAACTCTCCATTGATATTGATCAAGAGCAAGAAGTAGATGTCAACGAT GACTTGGTACGGGAGTTTGCGTTTTACACGCAGGCATTGGAGGGAGCTAGGCAGGCATTTGAGAAACTTCAGTCAACGCCTTTGAGACCTCCAGATTGTC ATGCAGAAATGGTGAAGACAGATTACCAAATGGTTTCGGTTAAAGGTCACATATTAGCCGAGAAGAAGAAGGTGGAAGAGGCAGATGACAGAAGAAAGGT CAAGCAGTCCCAGAGATTGGCCAAAGAGAACCAGGCCCAGAAATTGAAAGAAAGGGCAGAGGAGAAAAAGGAGGACATTGAATCTGTTAAGAATTGGAGG AAGCAAAGGCAACAGAGCAGGGTTGCTGATAGCGACGACGGTGCAGATACGGGTGTGGACTTAGAGGATGGAAAAGTATTTGAGAGGTCGAAGAAGAAAA GGCCTGGAGTGTCTCCGGATGATCGGTCTGGAGGGAAGGCAAAACAAACTGGTGGAAAAGGAAAGTTTCAAAAGAAAAAGGATTCCAAATTTGGTTTTGG AGGCAAGAAGGGAATGAAGAAGCAGAATTCATCTGACACCACTAGTGATTTTGGTGGATTCAAAAAGGGTGCTTTCACTGGAAATAAGAAGAGAAAGAGG TAAATTCCATCTTCAATTTGTTTTCTGAGGAAAGTGTGTCATCATGGGATGTGCCATTCATCATATTTTCATCTACTGTTTTAGTTCAACTTTCCTGGAA TTAGTTATTGTAACTTGATTAGCTTTTTCGGCAATTATAAACTTCTTTATATATCTACTGATTCTACTCCATTATTTGATGCTTTATTCAATGATCTATT ACTGTATGCTGTCCTTTGCACAAAAAGTACTTGTTGGCTAATTTGCAGCTTAAGTAAGCTCAAGAGCTCATAAAATATAAATAAAGCAAAAGGAATTCGT TTATCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_137214; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_339992
| Blastp | Probable rRNA-processing protein EBP2 homolog from Arabidopsis with 55.24% of identity |
|---|---|
| Blastx | Probable rRNA-processing protein EBP2 homolog from Arabidopsis with 53.2% of identity |
| Eggnog | EBNA1 binding protein 2(ENOG410YYHN) |
| Kegg | Link to kegg annotations (AT3G22660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439958.1) |
| Pfam | Eukaryotic rRNA processing protein EBP2 (PF05890.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |