Ll_transcript_334739

• Id Trinity: TRINITY_DN44228_c0_g1_i2
• Name Transcript: Ll_transcript_334739
• Sequence: TAAAAACAAAAATATCATTCTTTGATAATGCAACATTCCTAGCATTTTCTTATAGAAACATTGTCAACTTCAAGTCTTCTCTCCCAAACAAACTTCTATG CTTCACAATTTTGAGTTGTCTCTTCTTCTATGAGGGAAGAATAGTTGCAATTTGCTAGTGCATCAGTTTCAACTTCTTGACAACAAACAGAGTTCGGCTT ACGCGATTTTATTAGAGAATTCAGTAGGAATTGTATACTATGGTGGGATTGGAACTCATACCCATAGGTACTATCTTGGCTGTGCTAACAAATCAGGTGT TGAAAACAGCTCATGCAGCAGCTGATGTTCTTATTGGTAAAGAAAGTTTCAAGGTCCTTTCAAAACACCTGTTTGATATTGAACCGGTGCTAAAGGAATT ACAGCGTCAGGAATTGAATGAGTCTCAAGCTGCAAGGGTTGCCCTGGAGTCTCTTGAAGCAGATGTCAAAAAGGCGAATAACTTGGTTGAGAAGTATAGG AATCGCGGCCGTTTTTACTTGCTGGTTAAGTGCAGATCCATAGTGGAAGAGGTTGAACAGGTCACAAGGGATATTGGAAGGTCTCTAGCTGCACTTTCTA TTGCAAATACCGAGGTCCTATCGAGAATCTCTGATCAGGTTAATAGGCTGCAGAACGAGATGCAAAGGGTGGAGTTTGAGGCTTCACAATCTCAGCTTCA AATTGTTGACAAGTTGAACAATGGACTAAGAGAACAGAAACTAGATCAGGCTTTTGCGAATGACATGCTTGAAGAGATAGCAAGGGCAGTTGGGGTGCCA ATAGAATCGTCCGAGATAAGCAAAGAGTTGGCCAGCATTAGGAGGGAAAAAGAAGAGGCTGCCAACAGAAAAGAAAGAGCTGAGTTTATTTTCTTGGAGC AGATCATTGAGTTACTCTCTCGAGCTGATGCAGCAAGGGATTATGAAGAAGTTATGAAACAATACTTCGAAAGGGTTCTGGCGATAGAGAGATATGATTC AAGGGAAAAGTATATCCAGCCACTGAATTCTTTCCTTTGTTGCATAACTGGAGCTGTTATGGTAGACCCTGTCAGCCTTTGCACTGGTACTACATGTGAG AGATCAGCTATTGAAGGTTGGTTTTATGATGGCAACATGACTGACCCAGAAACAAACGAGGTTCTTGAAGATTTTACATTGAGGTCTAACATTCCATTAC GACAATCCATTGAAGAGTGGAGAGAACTTAATTACTGTCTTGTAATAAGGTCTGTCAGGGAAAACCTATTATCAAATCCTGACTTATATGTGGAAGAATC TCTGAACCAAATTCAAGCTCTCATAGCAGAGAACTCTATTAACAAGGATTGGATTTCTAGTGGAGGACTTACTGATAGTATTATATATATCCTTGGGATC TCTGATAAGAGAGATGTGAAGATGAATATTCTAATTACTTTGAGGCATGCTGTAGAGGGCCATGTAAGAAACAAGGAGAAAGTAGTTCAATCAGTAGGAT GGGATCAAATTATTTCCTGCTTAAGGAGTGACACTAGTGTTTCAAAGGAAGCGATAGATTTGCTATATGAGTTGCTTCAACATCGATCTGGTTGGAATGA ATGTTACTGCAAAAAGCTCTCTGAGAATAGCAATGCAGTTCTTTTTCTTGTCACCCTTCTCAAGGGTCCTGCTGCTAATTCGTCTTCAGCTGAGATTGCA GAAAAGATTTTGATGAAGCTTTTTGAAGTAAACGAGGACACCATTATAACTGCTGCTAATTTTGGCTGGTATAAACCACTTATTGATCATATGATTCAAG GTATGAATATAGACGATTTTGTAGTTGTTACTATGTTTATTTTGATTGGATAGAAATATTTCATTTTGTTGATGGTTGAAGATATCATTGACACAGAAAG GACAAATATGCTATGTCATCTAGTTAGCTGAGGAAATACAGAATCATCCTAAATTGTTTATGTTATTTGGTTGGAAAATGCATGCTTATTAAAACAGCAG TAAAATCATCTGTAGATATCATTGTTTCTTAGCAAGTGGTATTTGATCTCTTCCTATTCCATGTTCTAGATGACTATCCCTATAAACTACTTGTATAACC TGTCAAAATGTTCAAGTGATGCATGTATCTTCTTGGGAAAAAATAGCTTGCTTAAAACATGGCAAGTCATTTTTTATGGTGCATGACGATTCATCGATTT TGTTGTGTTTGTTTACATAGTAAAATTGAGACACTTGATTTCGAAATTGGACAATTATGCCTTAATGATCTCAAATTTACAATCCATATGGAGTTATTTG TCCTTGTTTGTCTTGTCAGGACCGGATTCAAGAATACCAATGGCGAAAGCCATAGTTAATATGGATTTGAATGATTTAAACTTGGAACTCGTTGGCAAGG AAGGAATTATTCGTCCATTGCTAGAAATGTTATCTGGAAATATCGAATCAAAAGAAGTGTCTTTATCAGCACTGGTTAAACTAGCAGGATGTCGTGCCAA CAAGGGAATCATTGCTGCATCAGGAGGTGTTCCTATTATTCTAGATTTAATGTTCTCTCCTCGAATCCGAACATTCACTACTGTAAAATGCTCTGAAATC CTTGAGAAGCTTTCTTGTGACGAGGATGGAATTGATTTCTTCGTTGATGGTGAAGGGAAACAACTAGAGTTAGATTCCATTATCACCAATTTGCTAGCTC TTCAGCAGTGGTCCAACTCAAGCAATGACTTCCGCAAGCCTGCTCTACGCGCTCTTCTTGGAATTTGCAAGTTTGAGAGTGGTTTAGTTAAGAAGGCAAT ACTAGCAGCAAATGGTGTATCTCTAATTCTTTCACTTCTCGATGATTCTGATTCAGAAATCCGTGAGATAGCTATAAACCTTCTCTTTCTTTTCTCTCAG CACGAGCCAGAAGGGGTAGTTGAATACCTCCTCAGGCCTAGAAGGCTTGAAGCATTGATTGGTTTTCTTGAGAATGATGACAACAATGATGTAAGGATGG CAGCTGCAGGTTTACTAGCTAACCTTCCAAAATCAGAAAGAGAACTAACTGTGAAGTTGATTGAATTAGGAGGACTTGATGCAATCATAAGCATTTTGAA AACTGGCACAATGGAAGCAAAAGAAAATGCTCTTAGTGCACTCTTCAGGTTCACTGATCCTACATATATCGAGTCGCAGCGCGATTTGGTTAAACGCGGA ATATACCCTCTGCTTGTAGATTTTCTCAATAACGGCTCAGTCACAGCAAAGGCAAGAGCAGCAGCATTCATCGGTGATCTCTCTATGAGCACTCCGAATC TCACAGTTGTTTCCAAATCACCTGGCTGCTGGTTTTTCAAGCCATCAAGAGTACATTTATGTTCAGCTCACGGTAGCGTATGCAGTGTAAGTCACACATT CTGTCTATTAGAAGCAAATGCTTTGCCTGGTTTGGTAAAGCTTTTGAATGATGAGGTTCATGCAACTGCTATTGAAGCAATACAAACACTTTCGACATTG GTTTTGGAAGAGTTTCCTCAAAGAGGTGCTCACGTGTTGCACGATTCTAATGCGATAAGACCCTTATTAGACATTTTGAACTGGGGAACTGATTCTCTCA AAGCAGAAGCTTTAGGACTATTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTTGAATCCTACGGAGCAACAGCTCGGTTACGCCTAGTTGGTATCACTGG TATGAATATATATGGTGATGGCCACCTTAGGAGAAAAGCTGCTAAGGTACTCTCGTTGCTCGAACGTTATTCAAGATCATCATCAGCTGCAATATCTGGA ATTTTGGAGTAAAGCTATAATTCCCTCGTTGGAACAATTTGCTTCAACATGTCACCCAATTTATATTAGATATTTGCCCTGGCCAAATGGTCTAATTCTA CTATATAAAGTTCCTATTGAAGTTCAAATGCATTCTCTGTATTTTCCTTTTTGTATGGACAATTCTATCAAACACACAAAAAACAACTGCCTACACGAGA CATGATTCATACGTCTGGCTATTTACATTTTACATCGACCGATGATCCATCCATCTCAGTGTGAGTAGTGATTTCCAGGAGTACATAGAATTTCCCTTTG TATTCTCACATTTCTTTCTATGATATTTTTGTTACTTAAAAATCCAAGGTACCTTCAAAATGAATTAGGACAGGTTTTTGCTCAGTTTGCAAATTGTAAT TAGATCTTTGTAAGTGGAAGCCAGTAAAAGTAGCATCTTTTCTCATATGTTTTGAACTTCTCAGCCTTCAAAATTGAAGTTGGATGATAGTTATCAACAC ATGTAATTGTCAACAAGCTAGCTGGTTCATTATGCTATTTGTGGTTAGCATGTGACTATGCATCAACTTGGCACACAGATCACCTAATAAAGGGGATAGT GCTATTACTACATAAACCAAAACTCACTAGTCACTACAGTGCATTGGGGCAGATTTTCATACACATTGCTATTCACTTTCTTTTTCATTATTTGACGTCC GGAGTAGGGCACATATCTTCTATCGTAAGATGTGTATCACTTCATGTACTCTTACATTTTTATTTGTTAG
• Tissue: pods
• Gene name: LI_gene_137321;
• Additional information: details;

Expression of Ll_transcript_334739

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.8
• PW2: 0.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_334739

• Blastp: U-box domain-containing protein 44 from Arabidopsis with 29.06% of identity
• Blastx: U-box domain-containing protein 44 from Arabidopsis with 29.06% of identity
• Eggnog: U-box domain-containing protein(ENOG410XRTN)
• Kegg: Link to kegg annotations (AT1G20780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449840.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;