Ll_transcript_334740

• Id Trinity: TRINITY_DN44228_c0_g1_i3
• Name Transcript: Ll_transcript_334740
• Sequence: TAAAAACAAAAATATCATTCTTTGATAATGCAACATTCCTAGCATTTTCTTATAGAAACATTGTCAACTTCAAGTCTTCTCTCCCAAACAAACTTCTATG CTTCACAATTTTGAGTTGTCTCTTCTTCTATGAGATTTTTTTGTAGGGAAGAATAGTTGCAATTTGCTAGTGCATCAGTTTCAACTTCTTGACAACAAAC AGAGTTCGGCTTACGCGATTTTATTAGAGAATTCAGTAGGAATTGTATACTATGGTGGGATTGGAACTCATACCCATAGGTACTATCTTGGCTGTGCTAA CAAATCAGGTGTTGAAAACAGCTCATGCAGCAGCTGATGTTCTTATTGGTAAAGAAAGTTTCAAGGTCCTTTCAAAACACCTGTTTGATATTGAACCGGT GCTAAAGGAATTACAGCGTCAGGAATTGAATGAGTCTCAAGCTGCAAGGGTTGCCCTGGAGTCTCTTGAAGCAGATGTCAAAAAGGCGAATAACTTGGTT GAGAAGTATAGGAATCGCGGCCGTTTTTACTTGCTGGTTAAGTGCAGATCCATAGTGGAAGAGGTTGAACAGGTCACAAGGGATATTGGAAGGTCTCTAG CTGCACTTTCTATTGCAAATACCGAGGTCCTATCGAGAATCTCTGATCAGGTTAATAGGCTGCAGAACGAGATGCAAAGGGTGGAGTTTGAGGCTTCACA ATCTCAGCTTCAAATTGTTGACAAGTTGAACAATGGACTAAGAGAACAGAAACTAGATCAGGCTTTTGCGAATGACATGCTTGAAGAGATAGCAAGGGCA GTTGGGGTGCCAATAGAATCGTCCGAGATAAGCAAAGAGTTGGCCAGCATTAGGAGGGAAAAAGAAGAGGCTGCCAACAGAAAAGAAAGAGCTGAGTTTA TTTTCTTGGAGCAGATCATTGAGTTACTCTCTCGAGCTGATGCAGCAAGGGATTATGAAGAAGTTATGAAACAATACTTCGAAAGGGTTCTGGCGATAGA GAGATATGATTCAAGGGAAAAGTATATCCAGCCACTGAATTCTTTCCTTTGTTGCATAACTGGAGCTGTTATGGTAGACCCTGTCAGCCTTTGCACTGGT ACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGCAACATGACTGACCCAGAAACAAACGAGGTTCTTGAAGATTTTACATTGAGGTCTA ACATTCCATTACGACAATCCATTGAAGAGTGGAGAGAACTTAATTACTGTCTTGTAATAAGGTCTGTCAGGGAAAACCTATTATCAAATCCTGACTTATA TGTGGAAGAATCTCTGAACCAAATTCAAGCTCTCATAGCAGAGAACTCTATTAACAAGGATTGGATTTCTAGTGGAGGACTTACTGATAGTATTATATAT ATCCTTGGGATCTCTGATAAGAGAGATGTGAAGATGAATATTCTAATTACTTTGAGGCATGCTGTAGAGGGCCATGTAAGAAACAAGGAGAAAGTAGTTC AATCAGTAGGATGGGATCAAATTATTTCCTGCTTAAGGAGTGACACTAGTGTTTCAAAGGAAGCGATAGATTTGCTATATGAGTTGCTTCAACATCGATC TGGTTGGAATGAATGTTACTGCAAAAAGCTCTCTGAGAATAGCAATGCAGTTCTTTTTCTTGTCACCCTTCTCAAGGGTCCTGCTGCTAATTCGTCTTCA GCTGAGATTGCAGAAAAGATTTTGATGAAGCTTTTTGAAGTAAACGAGGACACCATTATAACTGCTGCTAATTTTGGCTGGTATAAACCACTTATTGATC ATATGATTCAAGGACCGGATTCAAGAATACCAATGGCGAAAGCCATAGTTAATATGGATTTGAATGATTTAAACTTGGAACTCGTTGGCAAGGAAGGAAT TATTCGTCCATTGCTAGAAATGTTATCTGGAAATATCGAATCAAAAGAAGTGTCTTTATCAGCACTGGTTAAACTAGCAGGATGTCGTGCCAACAAGGGA ATCATTGCTGCATCAGGAGGTGTTCCTATTATTCTAGATTTAATGTTCTCTCCTCGAATCCGAACATTCACTACTGTAAAATGCTCTGAAATCCTTGAGA AGCTTTCTTGTGACGAGGATGGAATTGATTTCTTCGTTGATGGTGAAGGGAAACAACTAGAGTTAGATTCCATTATCACCAATTTGCTAGCTCTTCAGCA GTGGTCCAACTCAAGCAATGACTTCCGCAAGCCTGCTCTACGCGCTCTTCTTGGAATTTGCAAGTTTGAGAGTGGTTTAGTTAAGAAGGCAATACTAGCA GCAAATGGTGTATCTCTAATTCTTTCACTTCTCGATGATTCTGATTCAGAAATCCGTGAGATAGCTATAAACCTTCTCTTTCTTTTCTCTCAGCACGAGC CAGAAGGGGTAGTTGAATACCTCCTCAGGCCTAGAAGGCTTGAAGCATTGATTGGTTTTCTTGAGAATGATGACAACAATGATGTAAGGATGGCAGCTGC AGGTTTACTAGCTAACCTTCCAAAATCAGAAAGAGAACTAACTGTGAAGTTGATTGAATTAGGAGGACTTGATGCAATCATAAGCATTTTGAAAACTGGC ACAATGGAAGCAAAAGAAAATGCTCTTAGTGCACTCTTCAGGTTCACTGATCCTACATATATCGAGTCGCAGCGCGATTTGGTTAAACGCGGAATATACC CTCTGCTTGTAGATTTTCTCAATAACGGCTCAGTCACAGCAAAGGCAAGAGCAGCAGCATTCATCGGTGATCTCTCTATGAGCACTCCGAATCTCACAGT TGTTTCCAAATCACCTGGCTGCTGGTTTTTCAAGCCATCAAGAGTACATTTATGTTCAGCTCACGGTAGCGTATGCAGTGTAAGTCACACATTCTGTCTA TTAGAAGCAAATGCTTTGCCTGGTTTGGTAAAGCTTTTGAATGATGAGGTTCATGCAACTGCTATTGAAGCAATACAAACACTTTCGACATTGGTTTTGG AAGAGTTTCCTCAAAGAGGTGCTCACGTGTTGCACGATTCTAATGCGATAAGACCCTTATTAGACATTTTGAACTGGGGAACTGATTCTCTCAAAGCAGA AGCTTTAGGACTATTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTTGAATCCTACGGAGCAACAGCTCGGTTACGCCTAGTTGGTATCACTGGTATGAAT ATATATGGTGATGGCCACCTTAGGAGAAAAGCTGCTAAGGTACTCTCGTTGCTCGAACGTTATTCAAGATCATCATCAGCTGCAATATCTGGAATTTTGG AGTAAAGCTATAATTCCCTCGTTGGAACAATTTGCTTCAACATGTCACCCAATTTATATTAGATATTTGCCCTGGCCAAATGGTCTAATTCTACTATATA AAGTTCCTATTGAAGTTCAAATGCATTCTCTGTATTTTCCTTTTTGTATGGACAATTCTATCAAACACACAAAAAACAACTGCCTACACGAGACATGATT CATACGTCTGGCTATTTACATTTTACATCGACCGATGATCCATCCATCTCAGTGTGAGTAGTGATTTCCAGGAGTACATAGAATTTCCCTTTGTATTCTC ACATTTCTTTCTATGATATTTTTGTTACTTAAAAATCCAAGGTACCTTCAAAATGAATTAGGACAGGTTTTTGCTCAGTTTGCAAATTGTAATTAGATCT TTGTAAGTGGAAGCCAGTAAAAGTAGCATCTTTTCTCATATGTTTTGAACTTCTCAGCCTTCAAAATTGAAGTTGGATGATAGTTATCAACACATGTAAT TGTCAACAAGCTAGCTGGTTCATTATGCTATTTGTGGTTAGCATGTGACTATGCATCAACTTGGCACACAGATCACCTAATAAAGGGGATAGTGCTATTA CTACATAAACCAAAACTCACTAGTCACTACAGTGCATTGGGGCAGATTTTCATACACATTGCTATTCACTTTCTTTTTCATTATTTGACGTCCGGAGTAG GGCACATATCTTCTATCGTAAGATGTGTATCACTTCATGTACTCTTACATTTTTATTTGTTAG
• Tissue: pods
• Gene name: LI_gene_137321;
• Additional information: details;

Expression of Ll_transcript_334740

FPKM

• PAB: 0
• PNAB: 1.3
• PS1: 3.3
• PS2: 0.3
• PS3: 0.5
• PW1: 3.3
• PW2: 2.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_334740

• Blastp: U-box domain-containing protein 43 from Arabidopsis with 26.12% of identity
• Blastx: U-box domain-containing protein 43 from Arabidopsis with 26.02% of identity
• Eggnog: U-box domain-containing protein(ENOG410XRTN)
• Kegg: Link to kegg annotations (AT1G76390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449840.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;