Id Trinity | TRINITY_DN44243_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_334501 |
Sequence | AGTTTGAGGACATCAAGTTCAGGTAAAAAAATCGTAGAATCTTTCCGAGTTAAAAGCATCAATTGTTCCAATGTTATTTCAGGGAATGAACATTGAACAG CATATATAGCTCAAAAACTTGATGGCAGCTAAATCGAGGCTTGTTGTTCATGACTTAATTTGAAACTCGCTAATGTCTCTTAGAACAATCATTAACGTAT AAAACTTGATTATGTATTCAAGTTGAACTCACTAGCCCTTCAAGCTTGATGGTCTTTGCTTGAGCTTTAAACAATCATTAATGTCTACTTTTCTTTTTCT CTTGGAAGACCATGCTGATGTCTTTAAATTTCAATTATTTAGGGATAAATCGCGTGAGAAACAACGGAAAAAGAACTTGCAAGCAAAGAAAGAAGCCAAA GAGAAAGAGGTAAAACCTCAAAAACCAAGCAAAACCCCCAATAACTCTGCTGTCATGAGGAAGAAAACAGCCAAACAGAGACGTGCTCAGCAGACAGCTG AAGATGAGGAAGAGTTGACGCAAGAGTACCGGTTGTTGAAGAAATTGAAGAAAGGGATTATCGATGAGAATGAATATGCCAAGTTGACAGGCACCGAGGA ATTGCTTTGAAAGTAAAGCATGCATGCCTGATTGTGCTGTTCGGTACTCTGATTCGGCATTCTGAAAACCAAAATCTTGCTAGTAAGTCACGGCATCCTT TAACGCAACATGGTTCTATTGGGGCATTGTTGGTGAAGTTTACAGAGTTCTGAATTCAGAAGGATCAAATTCATTTTTGTAGCTGGTTGAGGCGTTTTAT GCCTCAAATGAACTGAATGATTTTGCATCTTATTGAAGTTAAAGTGGGGAATCAAGTGCAGAAACTTGTTGGAGGGTACAATTTTGTGGATGAGAATCAA GGTTATATGAACAGCACTGGGATTAATTTTATCCAAAATATTTTGCCTTCTGTTTAGTCTGTTTTATCTTTCTTTCTTTTTGAATTCCTTACAATATACA TCATTCATGTCACTTTCTTTACATTAAATTAGAAGTGTGTTCTAGGTTTGTAACATTATGAAACAATGTCATACTGAGAATTTTGTTTAGTGCCCTTGGT GAAGGTAATGAAATTAAGTTCCTTACCTATATTGTATGGAAATTTAATATTTCATTTTAGTTTTAGTGGGTTTTAGATGTGAA BLAST |
Tissue | pods |
Gene name | LI_gene_137347; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_334501
Blastp | DEAD-box ATP-dependent RNA helicase 18 from Oryza sativa with 50.51% of identity |
---|---|
Blastx | DEAD-box ATP-dependent RNA helicase 18 from Oryza sativa with 68.89% of identity |
Eggnog | atp-dependent rna helicase(ENOG410XNT7) |
Kegg | Link to kegg annotations (4324413) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437571.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |