Id Trinity | TRINITY_DN44249_c0_g1_i2 |
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Name Transcript | Ll_transcript_334598 |
Sequence | GTTCATTTTATTTTTTGTAAACAACACATGTTATGTTAAGAATAATAATCACAAACTGAAAGAAAAATATGTTAGTTTTTGGACAAAAAAAAATTAAAAT TATTTTGAATTTTTATTTTATTAGTGAATGCCTGAAATTTAGGTAATGTTTAAAAAACTTGATACGCAAAGGTGAAGAGTATCGCTTTGGTTTCACTGAT TCTCACGACATCCACCTCATCATCTCTCTACTCTACTTCACCCCAACCCTCAGCCAACAATGTTCACCGCCATAATTCAATCCACCGCCACCGTCATGCA CTTGCGCCTCCTCCGTAACGCCGCCGTTTCTTCCAACTACTTCTTCAACCATTCCCGACCCCTCAGGAACATGAAGCCTATCAGGGTTTCAATGTCTTCT CTTCCTCCTTCCGATCCTTTCGAAATTTGCGTTAAAGCTTCTGTTACCACTCCCAACAGGATCGGTGATTGTAAGCAATTTTTAAACCTTTTCCTATGCA GCTTTCTTCAATTCAATGTTATGCGCTCCCTTCTACAATTATTAAGTGACACTAGCAGATATTCAACTATAAAATGCCCCTTTTGCCAAAGGGTATTGCT CACACTGGAGGAAAAACATCTACCCTATGACTTGAAGTTGGTAGATTTGGCCAACAAGCCAGAGTGGTGATCTTCTTTCTGTTCCATTTCTCTAGTCTTA CTTTTCAATTTGTGCTAATAGAGTTTTTATTTTCATTAAACTGAATCACCTATTCATCACAGCATGGTCTGATCTGGTTATGCTGTTACTTTAGTTGTTG CTCATCATCATTTGTTTTGCTAGAGTAGGTTCTTAAAAATCAACCCACAGGGTAAAGTACCTGTGATAAAGTTTCATGAGAAGTGGGTTGCAGATTCAGA TGTTATCACACAAACACTTGAAGAGAAGTATCCTAGCCCACCATTGACAACCCCACCTGAAAAGACTAAAGTGTATGCATATTTTCTCTAATTTATGTGG TATATTCATCCATCTTCTAGATAGTCTCGTCACTAGACCTTGATGCTATATGTATGTTTCCCCCTTCTTCGATGCTCGATTTCCATTCTTTCATGTTTAC ATGCACATCTAATATAATGCATGGATGTTTTGTAGTCTTTTTTGGTTTCACATCTTTCCTTTCGTAGAAGTCTTTTGGTGGCTGTTAGTAAGAACTAAGG AATAGTCCTGTTAAGGCTACAAGACCTTATTCGAGGGTTTGGACATTTTGTTGGAAGTTAGGAACAAAAATCAACAAGTTATTTTTGTATGTCAATAACT TCAATGCCTCTTTTTAGACGGGTGGGAGTTTGAACTGCATGAATTAGTGAATGCTTAGAAAAATTCCACCAAGAGGATCTGGGTATTTTTTGTTTTCATA GTTCATACCTTTTAAGTGGATTTGAAATATAAAGTTGTAAACAAACTTGACTAGAACGCATCTGGAGGAATCAAAAGATAGTTGTATTGAAGATTTGAAA TGGAGGAATCAAAAGATAGTCCTATTGAAGATTTGTTTTCATAGTCCATGCTTTATCTAATACATTTCATTCTTTAAAACTTCCATAGTCATCTCTTCAC ATATCACAACTTCTTCGTACTTGAGACCAAGAAGGTAGCAGATGACTGAAAATGCTATTTTTTATGCTTATAATCTTTGATTCTGAGTTAGTAAATTTTC AATCGGAGTTGGTTGTTGTTATATTGCTTATGTGGCTTGGTTTCTGTTCGTTTTCAATCTTGGATGTTCCTTTGTTTTTAAAGATTAGGTCTAGAGGTAT ATTACCATCTTAATTTTTGCCTGCAGTGGGTCGAAGATCTTTTCCACCTTTATTGGGTTTCTCAAGAGCAAAGATCCCAATGATGGAACAGAGCAAACAT TACTAAGGGAACTGACCTCTTTCAATGATTACCTCAAGGAAAATGTATGTCTTTTTTCTTTGTAGCTTTGTTTTTTGTTTGCAATCTTATCAGTTTGTTG TTTCTAGTATAAAACCTTTTTAAGCTATAAAGTAAACAGAACGAAATTGTTTTACACGCATATCACTTGGTTTAATCCAAGGATTGTGTAGCAAAAAATG AATTAAATGTTGTAATGTCCAGCAAAGTAATTGATTCTCGCAGTTTGTGGGGCTTGGTATTTGCTTATTTTTTAAAACTGCAGGAAATTCTCTACATTTT TATCCAAATGACTGATCCTTTTTCTCTTTTAAGGGTCCTTTTGTCAATGGGAAAGAGATAACTGCCACAGACTTGTCAATTGGACCAAAGCTATACCATT TGGAGATTGCATTGGGGCATTTTAAGAAATGGACTGTACCCGATTCCCTTCCCTTTTTGCAGTCTTATATGAAGGTATGTTCAAGATGAGTCTACCTTGT CACTATCTTCATATGATTCTCTTTTACTCTAGGAAGGCAAATTTCAAGTTTAGAATTGTATGGCTGGTTACTTTCCTTTAACCCCATATATTTGCTGGCA AATATAAAACACCAGTAGTGGATTGATTTTGTGGAGTATATGCCAAAGGTATTCTGTTCTTATGGTCTATGTTGAAAACGGCATAGTTTAGTGCGAAAAA AATCTTATCATCAAGGATTTTTGGGTTCAGAATTCCTGTGAGCTCAAGTGTTTTCAGTAATTTAACATTATTCTAGACCAAATTGGAGTGGTCAGTAAGT TAAAAATAAAAATATAACCCCATTTACTGTTGTATATCATTTTCATGGGGTCAATTTCTACATTGAAGTTCAATAATTAGTTGTTTTCTGGTCGTTGATC CCTTATGCATTAGAAATTCTTTTGCTTAACTTCTTCTAATAATAATGTCAAAATGTACAGGCTATTTTCTCAAAGGAATCATTCATAAAAACATGCACAC AACCCCAAGATGTCATTGAAGGTTGGCGTCCAAAAGTCAAGGGCTGAAAATTGAAATCCATTGGTGCTGTTTTATGATTTTCATGATAGGCTCAGCTTGT CTCTAATATAGTATATATTCAACAGATGCAAATATACAACCCATCAAGAGTTCTACACATATATTATTTTGCTATGAGTTCTTGAATACATGCATTTGTA TGAATTATTGCCAATGAGTTCTTAATACATTCCAGAAGCAATTGGTGTTACATCTTAGAATATTGCAATGAGCTTTACATTTCACATTGCACTAGCATAG AAGCAACACACTCCACTGTTTGGACATGTGTATACACGTCACAATGAACTATGTAGAACCAAATTCTGACTAGTTTAGTTGGTACATACAGTTTATACTC CATCTTATCCAGCTAAGCGACCTACATTTTATACTCTCTCAATCTTATCCAGCAATTAATGCTTCTTTGACCATTTAGTTGATTAGTTCATCATTACAAA AGAG BLAST |
Tissue | pods |
Gene name | LI_gene_137355; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_334598
Blastp | Glutathione S-transferase DHAR3, chloroplastic from Arabidopsis with 42% of identity |
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Blastx | Glutathione S-transferase DHAR3, chloroplastic from Arabidopsis with 36.48% of identity |
Eggnog | Chloride intracellular channel(ENOG4110FKA) |
Kegg | Link to kegg annotations (AT5G16710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459154.1) |
Pfam | Glutathione S-transferase, N-terminal domain (PF13417.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |