| Id Trinity | TRINITY_DN44267_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_334606 |
| Sequence | CTTATTAACCCATTTAAAAATAAAATGAAGATTTAGCGTGGTAAGTGGTATTTCAACGAAATAAAGACATAAGCAGAGAAATGAGCGTAAACAAAACGCT GTCGTAAAACCGCAGAAAGAGAGAGCCAAAATCGTCTTTTCACTCAAAGGATCAACCCCTCTCAAAGGTTCACAATTTCAATAGAGATGGAAGATAATAA CAACAACAACAATAGCAGCCTTGTGGTGTTGAATGTTTACGATCTAACTCCTATTAACAGTTACATGTATTGGTTTGGTGTTGGGATCTATCACTCCGGT ATTCAAGTGCATGGTAAGGAATATGGATTTGGAGCTCACGACTTCCCGGCCAGTGGGGTTTTTGAAGTGGAGCCAAGGACATGTCCAGGATTTATATATA GAACTTCCATTACTTTGGGCCAAACAAATATGAGTGCTTCCGAGTTCCGAACATTTATTGAGATCATGTCTTGCAAGTATCACGGGGATACCTATCACCT TATATCTAAGAACTGCAATCATTTTACGGACGATGTCTCATTGAGATTGACTGGAAAACAAATCCCAGGTTGGGTGAATCGGCTTGCTAAGCTAGGTGCT TTGTGCAGCTGTCTCCTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTACCTGAGTACCATGAATTCTCGGAAGATGAATTTGTTGAGTCTCTTT CAACTGCGACACCCCGCGAGTCAACAGAAATAGAAGACGAGCAACAAAAGCATCTTCTGTCAGCATCAGATGTAACTGGGGATGTTATTTTCGTTAAAGA GGCCCATGCAAAATGAAGGTGATGGATGTGTTTGATTTGAGAAAACACTTGGAGAATATAGTCCGTCTTTGCTTGAATGTTTGTCCATTTTGATTTGCAG TGATTATTTTTTCCTAAAATTTTCTCATTCTTCTGTGGCTTTCTGCATTCTCTTTGGTTCAATCAATGTATCCTAGCAATTGTATCTAGTGTCGTGCTGA TTTGTGGATGAAGGTTTTAGTATGAAACTTATTTGTTCAGAAGGCTCAGAGCAACGAAAACATATGCACACACAACACCACCATTACCATTTTACCATAC CCAAATGCAAATTCCAACCACACCAAGCAAAGAATATGTAACGCTTCATAGTTCATACTTCTTAGTATCATTTTTTTCCTTTAATTCATTCCAAAAACTT CCCTTTTCCAACTTTCTCATTAACAACCTTTGGGAAAAACTGCCATTTCTTCTTAGACTTGTCCTTACCCTTGACACATTCCTTATCCCTCCAATTATCT CCAACAAAACCATTCCATAACTATAGATATCAGTTTTCTCAGAAACTCCAATCTCTAAGAGCCATTCAGGTGCTAAGTATCCTCTTGTTCCTCTAAGATT AGTCATGACTCTGCTCACATCCTTGCAAACAAGTTTTGAAAGACCAAAATCAGAAACAAGCGCTCTATATTTCTCATCTAGGAGTATATTTGCTGGCTTT CACATCAAGGTGCAATATCCTTTATCTGCAATCATGTTGAAGATATCTAAGTCCCTTAGCAACATCAATTGCCACTCTATACCTCAAATTCCAAAGAACC ATTTGGGATATACTCATAAACTAAGTACCTAGGAGCAGAAGGAGCATTGGAATAACCAAAGAGCCTCACAAGGTTAACATGTTGAACACCAGCAATGGCT GCAACTTCTGATCTGAACTCCTTTTCTCCTCTCTCTTCTCCATCAATTCTCTTTACAGCAACTGAAGTACCATCATTGAGAATTCCTTTGAAGACTGAAG CAGAAGACCCTTTTCCTATAAGTGCTTGAAACCCATCTATTGCTTCTTCAAGCTCCTTATATCGAAATTTTGTAGGAGCACCAGCAACTTTGACAGCTTC AATGAGACACGAGCAATGATGATTTCTGTGATCAGTACAATCACTGATACAATAGCAAATGTGATAACTTTTCTGTCCTCCATCAAAACTTCATTTCTTC TTCATTGTTATAAAGTTTAGATGTAAGTAAATGATAAATGAGTAACTTGTTTTTAGAGTGGGAGGTGTGATGGGTAAAATATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_137388; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_334606
| Blastp | DeSI-like protein At4g17486 from Arabidopsis with 60.11% of identity |
|---|---|
| Blastx | Probable receptor-like protein kinase At5g20050 from Arabidopsis with 68.87% of identity |
| Eggnog | Desumoylating isopeptidase(ENOG4111H3Z) |
| Kegg | Link to kegg annotations (AT4G17486) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439854.1) |
| Pfam | PPPDE putative peptidase domain (PF05903.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |