Id Trinity | TRINITY_DN44282_c0_g1_i2 |
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Name Transcript | Ll_transcript_334487 |
Sequence | CTTCCACCCCAGGTCATCACCGAAAAGAGATTTTAGGAAATGAATTAGTTGATGACTTTGAAATATTCATTCCTTACTTAACAGAAGCGAGGATCCAAAC AATTGCACCTTTGCTATAAGGATTCAATTACTCAATCCTTGAATTCCTGCTTACCTACAACTGGTAGAACCGCGAAGAAAAGAGCTTGAAGCGATCATAA AATGAAGATATTGGTTACCGGCGCTTCAGGTTACCTTGGTGGAAGGCTCTGTAACTCCCTCCTCCGTCAAGGTTACTCCGTCAGGGTGCTCGTCAGGTCA ACCAGCAACCTCTCCGCCCTTCCTCCGCCCTCCTCCTCCGCATCTCTCGAAATCGTCTACGGCGATGTCACCGACTACGCTTCTCTCCTATGTGCCTTCT CCGGTTGCTCCGTCGTCTTCCACGTCGCCGCTATCGTCGAACCCTGGCTTCCCGATCCTTCTAGATTCTTCTCAGTTAATGTTGGAGGATTGAAAAATGT GTTGGAGGCGGTGAAGGAAACGAAGACAGTGGAGAAACTGATATATACGTCATCGTTTTTCGCTCTAGGACCAAGTGATGATGGAGGTGTTGCTGATGAG AATCAAGTCCACCATGAGAAATTTTTCTGCACCGAGTATGAGAAATCAAAAGTTGCTGCTGATAAGATTGCTCTTCAAGCTGCGGCCGATGATGGATTTT CTATCGTGTTGCTTTATCCGGGAGTAATCTATGGGCCTGGCAAGGTCACTGCAGGGAATGTTGTTGCAAGAATTGTACTGTTTCTTCCACTGCACTTTTT TGTTGTTGTTTTTATCAACGCCATATGATGAGATATATAGTTGTTTGTCTAAATTGTTCTTCTGATATGCGTTTTATCTAACTGTCTGGGATGCAAATTA GAACCTTTGCTTTAAACAACTTAATTAGACTCTTAATAATTTAGTTCTTATCACTCAAGGGCTTGTGAGCTAATAAGTTATTTTTAGCTTATTTCTAACA ACGTATTGAAATCAGTTCAAAAGTTTATAGGAAGATCATGTGCTATTATTTTCATTAGTTCTTTCAAGCATTTGCTGATAAATGCTTATATGATAAGATA AACTCAAACTCTTCCAAGTAAGCTCTCTATAAGCTTTCCATACATAAAAAAAATCCTAATTGTGATAAGCACCACACTTCAGCATTTTTTGTCCCCTTTG AACAAATGTAGTAGTTTTTGTTCAATTAGATTTTTACAACATGGTATGCTTTACTGAAAGTGAAAATATACTTGATTTTGTTTCACTCCTCAGATAATAG AACGCTTTAGTGGCCGATTACCTGGTTACATAGGCTCTGGATATGAAAGATTTTCATTCAGCCATGTTGATGATGTGGTGGATGGACACATTGCAGCAAT GAAAAAAGGACAAATTGGGAATAGGTATCTACTAACAGGTGAAAATGCATCATTCAAGCAAGTTTTTGACATGGCTGCTGTGATCACAGATACTACAAAA CCAATATTTAGCATCCCTTTGTGGATCATTGAAGCGTATGGTTGGTTGTCAGTTTTATTTGCTCGAATAACTGGAAAGCTTCCCCTGATCAGTCCACCGG TAAGCTCTCTCTTGTTTTAGCATTTCTTAAAATTTTCATATGGTGTACTATGATGATGTGTATTGTATATCTGAAAGCATTCTTAAGCGCAAAGAAAGGA TCATTTTCTTCTAAATGTGTCCTGACCAACATGATGTTTATTTTAAAAAAAAATTAGCATCATTTTCTATTATTAGATATGAGACTTTTTAGGAATTAAT TACTATGAATTACGAGTATGTAGGAGTTACATTTTTCAAAAAACAAACCCACTTGTCTTTTGTGAAGATTATATAAGATGCTATCCTAATTAGTACTTAT TGTGCTTTATGATAACTATGTTTGCAACTCCATATTTATGTAGTTGTAATAAAATTCTCGTAACCCCGGACACTAATAAACAGTCATACTAAAATTTTCT TGATGTGGCAATTCAAATACCTTTACCTCTTCACCTATAAATGTACCTACCATGACAAGGTGCAAGCTGGCATATGAACTAGAAAACTCGACGTTGGTTC CCATTCCCATGTGTATTGTGCGTGTCTGTAGGGTTTCCTAGAGTTTCCCTATCTTCTGCCTAATGAAGGACTCACCAAGACCATAACACAACTATTCATA AAAGGCAAACACGTACAATATAATGAGATAAAAAAAGGTGTCGAGAATGTAGTTCTGTCTTCTTTGTGCTGAATTAAGAAAACAAGTGACATAATTGGAT TGGATATTGTATCGAGAGCTCCCCACACTGAGCTTTGCGGCATTGCAGCAGCGTTATTAGGTGCTACTGGCTTGGAATCATGGTATTCCATGGGTGTGGG TTGAGTGTGATTCATCTGCTGCAGTCCATATGGGGTCACACAGTTGCCCTCTCTCCTCACGCTTGTTCTTAGTTTGTTAACTCTATCTAAGCACTGAAGC AGAAGTCTTGATCCATTTGCATCATGCATGGTCTCCATGAAGACAACAAGGTAGCAATTTGACTGGCTAACTAGTCTCAGTTGAAGTTTTTTTGGCCTGC ACCCACTGGAGCAACCTCCATAGGGATGCGGCCATATTCTCGTTGATAATCGTATCGTGTTTTTTGTGTTTTGCTATAGTGGTTTTTCCCTCTCCTTGAT AAAGAAACCTTGGGAAACCAAGGGATGATTTTAGAAGAAACTAAGCATAGTATTGGAAAAATAAGGTTTACTTGAGAGTATAATTTATTGTTGTAATGCA CTTTTTCTTTTATCTAATTATTCGCTCTTTTTTATTCCCATTTTTATGTCCTTGTGATTATCTCTGTGTTTTAATCTTGGATCAGACTGTGCATACTATA AGGCATCGATGGGAGTACTCTTGTGAGAAAGCTAAACATGAGCTGGATTATAGTCCCAGAAACCTGAAAGATGGGCTCGCGGAAGTGCTACTCTGGTTGA AGAACTTGGGCTTGATAAGATATTAGTGACAATGTTTTAGTTCATGTTGTTGGGTTTTCCCTGTTGTAATATCATACAGAAATCAATAGCTGTAACAAAA CCACAATAACATTCAGAGTTAAAAGTATTTTATTGCTATTATTTAATTTAATCAGGGTAGAATGTAATAAAATTTAAACTTACTAGTGCGGGTTCAAAAC TCAGGGTGTTGTGTCCCTTTCCTATTCCATTCCTCCATTTTCATCTAATCGGAAGAATGGAAAGCCTTCTATAATCAAGGGTTTACAATATGTAATTGTA GTATATTTGAATGAAGGGTTTATAAAGTTGTGTTTCAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_137413; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_334487
Blastp | Putative dihydroflavonol 4-reductase from Synechocystis with 35.57% of identity |
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Blastx | Putative dihydroflavonol 4-reductase from Synechocystis with 33.33% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (slr1706) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433108.1) |
Pfam | RmlD substrate binding domain (PF04321.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |