| Id Trinity | TRINITY_DN44403_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_478391 |
| Sequence | AAAAAATGGTGATGAAGTTGACATGAATCAAAGTTTGACAAAAGGTTTATATTTTTCTTCCTTTGCGATGAATAAATCAATAAAGTAGAAGCGTGAGGTT TGAGTTTCAATTTTCTCACACAAATTCATTCATCTAATTTAGACTGATTCACTCTTCCTATCACTTTACGATGACATTGACCTTTATCATCTTTTCACTC ATCACTTCCCTCATTCTCCGATTCTCATTTACCCTCATTAACCGCCGCCGGAACAGGACCACCGCCGTCGCTTTCTTCCATCCCTACACCAACGACGGTG GCGGTGGGGAAAGGGTTCTGTGGTGCGCCGTCAGAGCCATCCAAGACGAAAGTCCTGACCTTGATTGTCTTGTCTACACCGGCGATCACGATGCCACTCC TCAGAGTCTTCTGGCTCGAGCCATTGATCGATTTGGGGTTACCCTTCTCTCTCCTCCAAAGGTGGTGCATTTGTACAAGAGAAAGTGGATTGAAGAAACT ACTTATCCGCACTTTACTATGATTGGTCAAAGTCTGGGTTCTGTGTATCTTGCCTGGGAAGCTTTGTGCAAGTTTACCCCTTTCTATTATTTTGACACAA GTGGATATGCTTTTACATATCCACTTGCCCGGTTGTTTGGTTGCAAAGTTATTTGCTATACGCATTATCCTACTATCAGTTCAGACATGATATCTCGTGT TCGTCAACGCAGCTTGATGTATAATAATGATGCCTTAGTTGCAAAAAGGTTTAATCTATAATTATTGGGTTATGTTTTTTTATTTTTTACCCAATTAATT TGAGTTTCATCCTGAGTTTTCTCCACACTCTTTTCTTTGCTTGGACAATGATGGCATCAGTCCTTTCTTTTCATTATTTCATAAATTTCAATATTTTTGC GTATCTGAATTGTTTAAAGGGTAAGTGGAAATGGGATGGGGGGGGGGTGTTCTCTAAAGTTGCTGCACCCTATGTTCCTGATTTCTATATAATTTTGATA TAATCTTTTGGCATATAGACTGTAAAAGTTGAAGTTTTTATCTATGGAAGTTCACCTTTTCTACTAACTGATTCCTTTCCCTCATCGAGATACCCTTCAA TTCATGCACATTTATGTGCTATAGAATGGGCTAAGTTTTATCAGATTCTGGGATTCAGAAATCTCATGGTCTATCTTTATACTTTTCCTGTAGCTATTCT GAGCTAAAATTAAATTTATGGACAACATATACTATTCTTGTAAAGTAATTTTTAATTATCATAAATTGCAACATTTTACTTTATTTCTTTTCCTCTTCTA AGAAGCCTAATAATTATTTTCTGGCAGTGTTTGGCTTTCCCGGTGCAAAATAGTCTATTATACATTCTTCAGTTGCTTGTATGGGATGGCAGGTTCTTGT GCACACCTAGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAAGCTTTGGGGAGTTCCTGACCGTATTAAGCGAGTCTATCCTCCTTGTGATA CTTCAGGACTCCAGGTGCTTCCGTTGGAAAGATCAGCTGAAATTCCTACTATAATATCCGTTGCACAATTTCGACCAGAGAAGGCACACAGTCTCCAACT TGAGGCTTTTTCGGCTGCTTTTAAGAGATTGGATTCTACCCTTCCAAAACCTAAGCTCCAATTCGTGGGTAGCTGTAGAAATAAATCAGATGAGGAAAGA CTTGAAATGTTAAAAAGGAAAGCACTTGAGCTGAATGTGAACGAACAAGTGGAATTTCACAAGAATATAACATACAGGTTAGTACCGGTGACTTTACATC TGAATATTCCCCCTCTAATACTCCAAGAGAGCACTTCCTCAGCTGATTTTTTAATTAAAAACAAGTGCTTTGTAGAATGTATACCTTCTGTTGCTCAATT AAGGGCATATATGATTGGCATTTCATCTAGTGTTGATTGCTAATTCAGAGACTGATCAGTTAGTGCTTTTTATTGATAAATTTTGGCAGACAGTTGGATT ATGCACATAATAATTTAAAAAACTACGATGGAAATTTAAAGTGTCTCAACTTCCTAGCATGAACTTGCTTAACTCAGACGTGTAGCTACAATTGGATGCT TTATGTATAAGCATGTACATGACATTAATGACTATTGACTAGTTTAAGCATCTTTGTTTGTTATTTGAAATTTGAATTAATTATGATCGCTTTTATCACA TCAGTTCATTTTTGAAGTAGTCAGTCAATTATTGAAGGGTGTATTTATGCTTCTGGATGTTAATTTTAAATACCATTTGACTATTATGATAGACCATTGC CTTAACCTGCAGAGAATTGGTGAGACTTTTAGGGGGTGCTGTTGCTGGCATCCATTCCATGACCGACGAACACTTCGGCATTAGTGTTGTAGAATATATG GCTGCTGGTGCCATCCCAATTGCACATAATTCTGCTGGCCCGAAAATGGACATTGTATTAGCTGAAGATGGAGAGCAAACAGGATTTCTTGCTTGGAATA TTGACGAATATGCAGACGCAATTTCAAGAATAATAAGGATGCCGGAGAAGGAGAGACTCCTGATGGCTTCTGCTGCAAGGAAACGAGCAAGGAGGTTTTC TGAACAGAGATTTTATGATGACTTCAAAGCTGCATTACGCCCTATTCTCTGTCATGTTTCTAAATGATGGCCTATCAAATAATCAACATCTTTGTAACTT AAAGTGTCCACAGTTCCTTCACTGTTCTCTTTTCTGCCACTTTAACTATTTAACAAGATAGATGGAGAACTTAATTACTGAAATAGTTACACTTTTGTTT TCTCTATAATTTCTTAGTCCATGTTATCTTTTATCCATTTATTTATAAAATAGTGGTTATGTTCATGGCATTATACCAAACCTTAAATGATTCTACTTGT AAGATGACTTCCCAAAGTTGAATTGGAATGTAAGGAGTGACTTTATGCTTGCAAGCATGATAGATCATATTTTAAATAAGATGATACCCGAAACTTGGTT CCAGTTTTTCTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_137633; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478391
| Blastp | GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase from Arabidopsis with 72.52% of identity |
|---|---|
| Blastx | GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase from Arabidopsis with 77.91% of identity |
| Eggnog | Glycosyl transferase (Group 1(COG0438) |
| Kegg | Link to kegg annotations (AT2G40190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429075.1) |
| Pfam | Glycosyl transferases group 1 (PF00534.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |