Ll_transcript_478392

• Id Trinity: TRINITY_DN44403_c0_g1_i2
• Name Transcript: Ll_transcript_478392
• Sequence: AAAAAATGGTGATGAAGTTGACATGAATCAAAGTTTGACAAAAGGTTTATATTTTTCTTCCTTTGCGATGAATAAATCAATAAAGTAGAAGCGTGAGGTT TGAGTTTCAATTTTCTCACACAAATTCATTCATCTAATTTAGACTGATTCACTCTTCCTATCACTTTACGATGACATTGACCTTTATCATCTTTTCACTC ATCACTTCCCTCATTCTCCGATTCTCATTTACCCTCATTAACCGCCGCCGGAACAGGACCACCGCCGTCGCTTTCTTCCATCCCTACACCAACGACGGTG GCGGTGGGGAAAGGGTTCTGTGGTGCGCCGTCAGAGCCATCCAAGACGAAAGTCCTGACCTTGATTGTCTTGTCTACACCGGCGATCACGATGCCACTCC TCAGAGTCTTCTGGCTCGAGCCATTGATCGATTTGGGGTTACCCTTCTCTCTCCTCCAAAGGTGGTGCATTTGTACAAGAGAAAGTGGATTGAAGAAACT ACTTATCCGCACTTTACTATGATTGGTCAAAGTCTGGGTTCTGTGTATCTTGCCTGGGAAGCTTTGTGCAAGTTTACCCCTTTCTATTATTTTGACACAA GTGGATATGCTTTTACATATCCACTTGCCCGGTTGTTTGGTTGCAAAGTTATTTGCTATACGCATTATCCTACTATCAGTTCAGACATGATATCTCGTGT TCGTCAACGCAGCTTGATGTATAATAATGATGCCTTAGTTGCAAAAAGGTTTAATCTATAATTATTGGGTTATGTTTTTTTATTTTTTACCCAATTAATT TGAGTTTCATCCTGAGTTTTCTCCACACTCTTTTCTTTGCTTGGACAATGATGGCATCAGTCCTTTCTTTTCATTATTTCATAAATTTCAATATTTTTGC GTATCTGAATTGTTTAAAGGGTAAGTGGAAATGGGATGGGGGGGGGGTGTTCTCTAAAGTTGCTGCACCCTATGTTCCTGATTTCTATATAATTTTGATA TAATCTTTTGGCATATAGACTGTAAAAGTTGAAGTTTTTATCTATGGAAGTTCACCTTTTCTACTAACTGATTCCTTTCCCTCATCGAGATACCCTTCAA TTCATGCACATTTATGTGCTATAGAATGGGCTAAGTTTTATCAGATTCTGGGATTCAGAAATCTCATGGTCTATCTTTATACTTTTCCTGTAGCTATTCT GAGCTAAAATTAAATTTATGGACAACATATACTATTCTTGTAAAGTAATTTTTAATTATCATAAATTGCAACATTTTACTTTATTTCTTTTCCTCTTCTA AGAAGCCTAATAATTATTTTCTGGCAGTGTTTGGCTTTCCCGGTGCAAAATAGTCTATTATACATTCTTCAGTTGCTTGTATGGGATGGCAGGTTCTTGT GCACACCTAGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAAGCTTTGGGGAGTTCCTGACCGTATTAAGCGAGTCTATCCTCCTTGTGATA CTTCAGGACTCCAGGTGCTTCCGTTGGAAAGATCAGCTGAAATTCCTACTATAATATCCGTTGCACAATTTCGACCAGAGAAGGCACACAGTCTCCAACT TGAGGCTTTTTCGGCTGCTTTTAAGAGATTGGATTCTACCCTTCCAAAACCTAAGCTCCAATTCGTGGGTAGCTGTAGAAATAAATCAGATGAGGAAAGA CTTGAAATGTTAAAAAGGAAAGCACTTGAGCTGAATGTGAACGAACAAGTGGAATTTCACAAGAATATAACATACAGAGAATTGGTGAGACTTTTAGGGG GTGCTGTTGCTGGCATCCATTCCATGACCGACGAACACTTCGGCATTAGTGTTGTAGAATATATGGCTGCTGGTGCCATCCCAATTGCACATAATTCTGC TGGCCCGAAAATGGACATTGTATTAGCTGAAGATGGAGAGCAAACAGGATTTCTTGCTTGGAATATTGACGAATATGCAGACGCAATTTCAAGAATAATA AGGATGCCGGAGAAGGAGAGACTCCTGATGGCTTCTGCTGCAAGGAAACGAGCAAGGAGGTTTTCTGAACAGAGATTTTATGATGACTTCAAAGCTGCAT TACGCCCTATTCTCTGTCATGTTTCTAAATGATGGCCTATCAAATAATCAACATCTTTGTAACTTAAAGTGTCCACAGTTCCTTCACTGTTCTCTTTTCT GCCACTTTAACTATTTAACAAGATAGATGGAGAACTTAATTACTGAAATAGTTACACTTTTGTTTTCTCTATAATTTCTTAGTCCATGTTATCTTTTATC CATTTATTTATAAAATAGTGGTTATGTTCATGGCATTATACCAAACCTTAAATGATTCTACTTGTAAGATGACTTCCCAAAGTTGAATTGGAATGTAAGG AGTGACTTTATGCTTGCAAGCATGATAGATCATATTTTAAATAAGATGATACCCGAAACTTGGTTCCAGTTTTTCTAAA
• Tissue: pods
• Gene name: LI_gene_137633;
• Additional information: details;

Expression of Ll_transcript_478392

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.5
• PS2: 0.2
• PS3: 0.3
• PW1: 0.6
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478392

• Blastp: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase from Arabidopsis with 73.66% of identity
• Blastx: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase from Arabidopsis with 73% of identity
• Eggnog: Glycosyl transferase (Group 1(COG0438)
• Kegg: Link to kegg annotations (AT2G40190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429075.1)
• Pfam: Glycosyl transferases group 1 (PF00534.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;