Id Trinity | TRINITY_DN44403_c0_g1_i4 |
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Name Transcript | Ll_transcript_478394 |
Sequence | AAAAAATGGTGATGAAGTTGACATGAATCAAAGTTTGACAAAAGGTTTATATTTTTCTTCCTTTGCGATGAATAAATCAATAAAGTAGAAGCGTGAGGTT TGAGTTTCAATTTTCTCACACAAATTCATTCATCTAATTTAGACTGATTCACTCTTCCTATCACTTTACGATGACATTGACCTTTATCATCTTTTCACTC ATCACTTCCCTCATTCTCCGATTCTCATTTACCCTCATTAACCGCCGCCGGAACAGGACCACCGCCGTCGCTTTCTTCCATCCCTACACCAACGACGGTG GCGGTGGGGAAAGGGTTCTGTGGTGCGCCGTCAGAGCCATCCAAGACGAAAGTCCTGACCTTGATTGTCTTGTCTACACCGGCGATCACGATGCCACTCC TCAGAGTCTTCTGGCTCGAGCCATTGATCGATTTGGGGTTACCCTTCTCTCTCCTCCAAAGGTGGTGCATTTGTACAAGAGAAAGTGGATTGAAGAAACT ACTTATCCGCACTTTACTATGATTGGTCAAAGTCTGGGTTCTGTGTATCTTGCCTGGGAAGCTTTGTGCAAGTTTACCCCTTTCTATTATTTTGACACAA GTGGATATGCTTTTACATATCCACTTGCCCGGTTGTTTGGTTGCAAAGTTATTTGCTATACGCATTATCCTACTATCAGTTCAGACATGATATCTCGTGT TCGTCAACGCAGCTTGATGTATAATAATGATGCCTTAGTTGCAAAAAGTGTTTGGCTTTCCCGGTGCAAAATAGTCTATTATACATTCTTCAGTTGCTTG TATGGGATGGCAGGTTCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAAGCTTTGGGGAGTTCCTGACCGTATTAAGC GAGTCTATCCTCCTTGTGATACTTCAGGACTCCAGGTAAGCAATGTGGGCAGGTGCTTCCGTTGGAAAGATCAGCTGAAATTCCTACTATAATATCCGTT GCACAATTTCGACCAGAGAAGGTGGGCAGACAACTCCTATCAGCCTTGTGAATGGGTGGTACAACCATTTTTTTTGTTCCTTTGAGCCTTTGTTGATCAT ACAAAATTTACATGTTTCTTTTCATCATAGGCACACAGTCT BLAST |
Tissue | pods |
Gene name | LI_gene_137633; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478394
Blastp | GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase from Arabidopsis with 72.97% of identity |
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Blastx | GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase from Arabidopsis with 76.35% of identity |
Eggnog | Glycosyl transferase (Group 1(COG0438) |
Kegg | Link to kegg annotations (AT2G40190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429075.1) |
Pfam | ALG11 mannosyltransferase N-terminus (PF15924.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |