Id Trinity | TRINITY_DN44405_c0_g1_i1 |
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Name Transcript | Ll_transcript_478039 |
Sequence | CTCATCCCTTCTAGACACAACACCCTTTCAACCTTAGTTGTTTCACTATTCTTATTCTCCACAAACACAACTATTCTATTCTATTCTATTTCCCATTTTC TTTACTTTTATACTAAGCTTTGCGCCAAATGAATACAAACCCAGGTTTCACATTTCTTTATCAACACCTTTTCCTCTTATAACATCTTTCATCTCATTTC TCTTCAATTTCTCCACACCTTCCATTTTCTCTATACTTCTTTTCACCTTTCACCAACTCTCTGTTTCTTTCTTCAATTCCCTTTCGTTTTGTTAGCAGCA CGCATTATCAAAGAAGATGGTTATAGCTAGTTACAGTACTTTGATTCAATAAAAAACTGATTTTTTTCCCTCATCAGAACTGAGATCATTGGAAGAGCTT TTTGCTGAATTTGGTATTTGACTTTCACATCTTCTGTGCAAACTTTGTGGCCAAAATCCAATTTCTGTACTGTGATTAAGTACATATTTGGAACAATATG TCTGGTGAGTTCGCTTCGAAATTTCGGCTAGTTAAATGTCCAAAATGCTGGCTACTTCTTCCAGAGAATCCAAAATATAATGTGTATAGCTGTGGTGGAT GTGGTACAATTCTCCAAGCTAATAATCGAAAACGTGTTGCTGCAAACTCAGAATCCAGTACACAAGAAACTGCTGCAGCTCCCAGAAATGCACCGGTTCC TCCTCGAAAGAATGGTTTGAAGGCCAAAGCAGATACTTCTTCCTCTAGAGACAGTTCTTTGGATGGAAAAGTCGGAAGGGGTCAACACAAAATTGGTAAA AGCAATGGAGAGCTTCTTGAACCATTTAGTTTATCTGATGAAGAACTGGAAAGCGAGTTGGATATCTATAAATTGACACACAGAAGGCATAGAGTCTCCA ACAAAGGTTCTTCAAGTAAGACCAGTCACTGTGAGATTGAGGAGATACATAATGTGTCAGATGAAAATGGCAATAATGAGAAATCAGCTCAAGTAGGGGT AAAGTCTGAAATGGAGATTAATGAAAGTCGTTTAGAAGGATCAGAACTATTAGATGGAAACTTGTCACTAGAAAGAGCACAAGAGGAGTTAGTTTCTGGA TCAGTTTGCGAAGATGCCAATAATGACATATCAGATATGGTTGGTGCAAACCCTGAAGTGGAAATTAATAGAAATGATTTAGAAGGATCGGAAGAGTTAA GTGATGGAAAACTGTTGCCAGAGGGGGCGGAAAAGCAGTTACATTCTGGATCAGATGGACAAGATGCCGATAAAGACAAGTTAACTCTTGCAGGTGCAAA CCCTGAAATGGAAACTAGTGGAAGTGATTCAGAAGGAGCAAAAGAGTTAAATAGTGGAAAATTATCACTGAAAGGTACAGCGGAGGAGTTAGTTTCTGGA TTGGATGGAGATGTCAGCAATGATAAATCAGGTCTAGTTGGTGAAAATCTTGAAGTGGAAATTAGTGGAAGAAGTATAGCAGAAGAAGAGTTGAATAGTG GAAAATTGTTATCAGAGGGAACAGAAGAGGAGTTAAGTAGACTTGCACTGGGAGTAGATGATACCAACATTGAGCAATTAGTTTCAGTGGGTTCAAAACC TGAAGTGGACGTTACAGTAAGGGCTTCTGCTACCAAAAGGTTAAGTACTGATAACTTTGTATCAGAAAAGAGAAGCATTTTACCAGTTACTCCTGGTAAG CTTGAAGATGGTACATCTGGTAATCCCGTGTCATCTAATAAACAACAAATGGAATCTCAGAAAAATATTCGCAAAAGGTTTGACCGTGTAAGGTTTGTGG AAACATTAGTTTCACCAAAGCCTAGTGGTATTCCTGGAGAATCGTATAAATCTCGAACCACTAGACGGTATTGTGGTTATGATGGAAGTGTCTCTGTTAA TGATGCAAAAGATAAGAGCTTTCCTATCCAACATTTAGATTCTTTCGAGAACACTGACATGGTTGCTAATGGTGTTTCTGAGGGAAGGAGCAGAAAGGGA AAGGGCCATGTTAATAGCATGTCATATGGAGATCATGGAACACAAAACCAACCATATTTGCCCAATGGAAAGCATCGTGTCATGGAAGACAGAATAAGGA ATCAAAACAAATTGCTGGAAACTGAAAAACATGGTCATCCACATTGGATGAGAACAAAGAGAGATGAGTTTCCATCTAGAATTCATTTCCATCAAAGTGG TTTCCAATCTCACTATGTAAGAGGCACCCGATCAAAACAAATGCGTGATGAAACTGACTCCGGTGAGGACACTGAGCAGGAGAAGATGAAACTGTTGAGA ATGGTTCACAAGTTGCAGGATCAACTAAACAGGACTCGCTCTGCGAGTCAAAAAACAAATGGAAGATTGTCCACAGGCCTTTCTTATAAGGGAAAGCATG TTCCTGCATACCATAACCATGATCTTCACGAGGGAATATTTTCTCATGGAATGGACTATCCTATACCTACTTGTATTGGAAGATGTACTCATGGAAGCAA CTTGCAACAAAGGCATAAATTTTCAAGGATACCTTATTCAACTGAGGTAAAAAGCAGTGCCCACCATGCTGATCATTCTTGTTTTCATTACTATCCACAC AAGCAGCATTTCTCAGCAGATTTACTTCAGCGTGAAGAGCTATATAGGTCCTATCCTGACCGAGGTTGCTGCTCTTTGAATTCAACTCCACAAAGGTTTA AAACCTCTCAACTCCCAGTATATGACCATGAAACAAATTCTGATGACCAAAGGTATATGCTTCCGAAGGTCAAGAAACATTTGAAGTGGAAACCAAATTC GCCTAAGAGATACTACAAGCCAGTAGCAGGTGGTGCTCCTTTTGTCACTTGCCATAAATGCTTTAAGCTGCTTCATCTGCCTGCGGATTTTCTCCTTCAT AAAAGGGTATGTCATCAAATAAAGTGTGGTCAATGTTCAGAGATACTCAAATTTTCCCTGCAGAATGGAAGTCATATAGTTTCTTATTCACCAAGTGTTG TTATAGCCCCTCCATCAAGTGACCTTGATAACCAAAATAGATGATTAACAATAGAAGCAATCTACCTCCAGCATCTCATGCCATTTCATATTCTCATAAT AATGGCCTTCATGTCTCTAAAAATTACTCCTCAGAATGAGAACCTCTTTCCCTAACACAAATTCATCCCTTGCATGGCAGTGAATATGATAACATTTGAG GTTGATGCTTTAACTGAGAAGGAGATTACTTCAAGAGATTCTAGTATAAGCAAGGTTCCTGTGGGAACAGATCGACCAGCTGAGCTTTCCTCCAATATCA CTGTCTCAGAGAGTTCGAATATGACTGTCTTGAGAAAAGGAGGCAAAGTAACCACCAAAAAGTTCATCACTCATAAGCTGATGGGAGAGAATCACTTCTT GAAGGTAAAGTGCTCAGAAAAGAGAGTTTCCTGGATATGTTATAGAATCCACATGGTGGCTTGAGTGTTTGGATTGTAAGGCTTCACTCTCAAAGTCATG ATCAATGATAATTCAATCCTTTGTAAAAAAACCAGGCAATGGGTGTTTCATAAGCAGTTTAAGCTCCAATGTAAAGGTATATAGCATACATACCTTTTCA GCAACATGTGCTATGCACTGTGTCATGCACAGAATTAGATAACAATTGTAAAAATATGATTTTGACATATATGGAAGTGATTTATGTGAGTATTTTAAAG TCATATTAAAAATTCAGAATTTCTCTTTGATAAACâBLAST |
Tissue | pods |
Gene name | LI_gene_137637; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478039
Blastp | Protein ENHANCED DISEASE RESISTANCE 4 from Arabidopsis with 46.38% of identity |
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Blastx | Protein ENHANCED DISEASE RESISTANCE 4 from Arabidopsis with 46.38% of identity |
Eggnog | Protein of unknown function (DUF3133)(ENOG410YZZS) |
Kegg | Link to kegg annotations (AT5G05190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414443.1) |
Pfam | Probable zinc-ribbon domain (PF11331.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |