Ll_transcript_478040

• Id Trinity: TRINITY_DN44405_c0_g1_i2
• Name Transcript: Ll_transcript_478040
• Sequence: CTCATCCCTTCTAGACACAACACCCTTTCAACCTTAGTTGTTTCACTATTCTTATTCTCCACAAACACAACTATTCTATTCTATTCTATTTCCCATTTTC TTTACTTTTATACTAAGCTTTGCGCCAAATGAATACAAACCCAGGTTTCACATTTCTTTATCAACACCTTTTCCTCTTATAACATCTTTCATCTCATTTC TCTTCAATTTCTCCACACCTTCCATTTTCTCTATACTTCTTTTCACCTTTCACCAACTCTCTGTTTCTTTCTTCAATTCCCTTTCGTTTTGTTAGCAGCA CGCATTATCAAAGAAGATGGTTATAGCTAGTTACAGTACTTTGATTCAATAAAAAACTGATTTTTTTCCCTCATCAGAACTGAGATCATTGGAAGAGCTT TTTGCTGAATTTGGTATTTGACTTTCACATCTTCTGTGCAAACTTTGTGGCCAAAATCCAATTTCTGTACTGTGATTAAGTACATATTTGGAACAATATG TCTGGTGAGTTCGCTTCGAAATTTCGGCTAGTTAAATGTCCAAAATGCTGGCTACTTCTTCCAGAGAATCCAAAATATAATGTGTATAGCTGTGGTGGAT GTGGTACAATTCTCCAAGCTAATAATCGAAAACGTGTTGCTGCAAACTCAGAATCCAGTACACAAGAAACTGCTGCAGCTCCCAGAAATGCACCGGTTCC TCCTCGAAAGAATGGTTTGAAGGCCAAAGCAGATACTTCTTCCTCTAGAGACAGTTCTTTGGATGGAAAAGTCGGAAGGGGTCAACACAAAATTGGTAAA AGCAATGGAGAGCTTCTTGAACCATTTAGTTTATCTGATGAAGAACTGGAAAGCGAGTTGGATATCTATAAATTGACACACAGAAGGCATAGAGTCTCCA ACAAAGGTTCTTCAAGTAAGACCAGTCACTGTGAGATTGAGGAGATACATAATGTGTCAGATGAAAATGGCAATAATGAGAAATCAGCTCAAGTAGGGGT AAAGTCTGAAATGGAGATTAATGAAAGTCGTTTAGAAGGATCAGAACTATTAGATGGAAACTTGTCACTAGAAAGAGCACAAGAGGAGTTAGTTTCTGGA TCAGTTTGCGAAGATGCCAATAATGACATATCAGATATGGTTGGTGCAAACCCTGAAGTGGAAATTAATAGAAATGATTTAGAAGGATCGGAAGAGTTAA GTGATGGAAAACTGTTGCCAGAGGGGGCGGAAAAGCAGTTACATTCTGGATCAGATGGACAAGATGCCGATAAAGACAAGTTAACTCTTGCAGGTGCAAA CCCTGAAATGGAAACTAGTGGAAGTGATTCAGAAGGAGCAAAAGAGTTAAATAGTGGAAAATTATCACTGAAAGGTACAGCGGAGGAGTTAGTTTCTGGA TTGGATGGAGATGTCAGCAATGATAAATCAGGTCTAGTTGGTGAAAATCTTGAAGTGGAAATTAGTGGAAGAAGTATAGCAGAAGAAGAGTTGAATAGTG GAAAATTGTTATCAGAGGGAACAGAAGAGGAGTTAAGTAGACTTGCACTGGGAGTAGATGATACCAACATTGAGCAATTAGTTTCAGTGGGTTCAAAACC TGAAGTGGACGTTACAGTAAGGGCTTCTGCTACCAAAAGGTTAAGTACTGATAACTTTGTATCAGAAAAGAGAAGCATTTTACCAGTTACTCCTGGTAAG CTTGAAGATGGTACATCTGGTAATCCCGTGTCATCTAATAAACAACAAATGGAATCTCAGAAAAATATTCGCAAAAGGTTTGACCGTGTAAGGTTTGTGG AAACATTAGTTTCACCAAAGCCTAGTGGTATTCCTGGAGAATCGTATAAATCTCGAACCACTAGACGGTATTGTGGTTATGATGGAAGTGTCTCTGTTAA TGATGCAAAAGATAAGAGCTTTCCTATCCAACATTTAGATTCTTTCGAGAACACTGACATGGTTGCTAATGGTGTTTCTGAGGGAAGGAGCAGAAAGGGA AAGGGCCATGTTAATAGCATGTCATATGGAGATCATGGAACACAAAACCAACCATATTTGCCCAATGGAAAGCATCGTGTCATGGAAGACAGAATAAGGA ATCAAAACAAATTGCTGGAAACTGAAAAACATGGTCATCCACATTGGATGAGAACAAAGAGAGATGAGTTTCCATCTAGAATTCATTTCCATCAAAGTGG TTTCCAATCTCACTATGTAAGAGGCACCCGATCAAAACAAATGCGTGATGAAACTGACTCCGGTGAGGACACTGAGCAGGAGAAGATGAAACTGTTGAGA ATGGTTCACAAGTTGCAGGATCAACTAAACAGGACTCGCTCTGCGAGTCAAAAAACAAATGGAAGATTGTCCACAGGCCTTTCTTATAAGGGAAAGCATG TTCCTGCATACCATAACCATGATCTTCACGAGGGAATATTTTCTCATGGAATGGACTATCCTATACCTACTTGTATTGGAAGATGTACTCATGGAAGCAA CTTGCAACAAAGGCATAAATTTTCAAGGATACCTTATTCAACTGAGGTAAAAAGCAGTGCCCACCATGCTGATCATTCTTGTTTTCATTACTATCCACAC AAGCAGCATTTCTCAGCAGATTTACTTCAGCGTGAAGAGCTATATAGGTCCTATCCTGACCGAGGTTGCTGCTCTTTGAATTCAACTCCACAAAGGTTTA AAACCTCTCAACTCCCAGTATATGACCATGAAACAAATTCTGATGACCAAAGGTATATGCTTCCGAAGGTCAAGAAACATTTGAAGTGGAAACCAAATTC GCCTAAGAGATACTACAAGCCAGTAGCAGGTGGTGCTCCTTTTGTCACTTGCCATAAATGCTTTAAGCTGCTTCATCTGCCTGCGGATTTTCTCCTTCAT AAAAGGGTATGTCATCAAATAAAGTGTGGTCAATGTTCAGAGATACTCAAATTTTCCCTGCAGAATGGAAGTCATATAGTTTCTTATTCACCAAGTGTTG TTATAGCCCCTCCATCAAGTGACCTTGATAACCAAAATAGATGATTAACAATAGAAGCAATCTACCTCCAGCATCTCATGCCATTTCATATTCTCATAAT AATGGCCTTCATGTCTCTAAAAATTACTCCTCAGAATGAGAACCTCTTTCCCTAACACAAATTCATCCCTTGCATGGCAGTGAATATGATAACATTTGAG GTTGATGCTTTAACTGAGAAGGAGATTACTTCAAGAGATTCTAGTATAAGCAAGGTTCCTGTGGGAACAGATCGACCAGCTGAGCTTTCCTCCAATATCA CTGTCTCAGAGAGTTCGAATATGACTGTCTTGAGAAAAGGAGGCAAAGTAACCACCAAAAAGTTCATCACTCATAAGCTGATGGGAGAGAATCACTTCTT GAAGGTAAAGTGCTCAGAAAAGAGAGGTATAATTCTCAACCGACTAAAATGTTTGGTGAATCTAAACTGAGGATGGGAGAGATTCAAGAATGGCAGAGTT CTCAATCAGAAACTATGTACAAACAAAGCATCTATATGGTGAATTGATGTGATTTAGTTTTTTTGCAGTTTCCTGGATATGTTATAGAATCCACATGGTG GCTTGAGTGTTTGGATTGTAAGGCTTCACTCTCAAAGTCATGATCAATGATAATTCAATCCTTTGTAAAAAAACCAGGCAATGGGTGTTTCATAAGCAGT TTAAGCTCCAATGTAAAGGTATATAGCATACATACCTTTTCAGCAACATGTGCTATGCACTGTGTCATGCACAGAATTAGATAACAATTGTAAAAATATG ATTTTGACATATATGGAAGTGATTTATGTGAGTATTTTAAAGTCATATTAAAAATTCAGAATTTCTCTTTGATAAAC
• Tissue: pods
• Gene name: LI_gene_137637;
• Additional information: details;

Expression of Ll_transcript_478040

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.7
• PS2: 0
• PS3: 0.2
• PW1: 1.1
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478040

• Blastp: Protein ENHANCED DISEASE RESISTANCE 4 from Arabidopsis with 46.38% of identity
• Blastx: Protein ENHANCED DISEASE RESISTANCE 4 from Arabidopsis with 46.38% of identity
• Eggnog: Protein of unknown function (DUF3133)(ENOG410YZZS)
• Kegg: Link to kegg annotations (AT5G05190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414443.1)
• Pfam: Probable zinc-ribbon domain (PF11331.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;