Ll_transcript_478204

• Id Trinity: TRINITY_DN44411_c0_g1_i3
• Name Transcript: Ll_transcript_478204
• Sequence: AACAAAACCATTTTCCCTCTCGATGAAGAAGCATAGTAATTGGAACGTTTGAAATTTAACTCTGTACTCTGAAAGGAAGAGAAACATATAGTGCAATGAC AGCGAAGAAGAGGCTTCACTCATCTCTACATTCCTCGCCACAAGAATTTCTGAACTCAGCCCTAAAGCTATCACTCAAATCTTCAAAACCACATTTCAAA ACCCTAATCCATTCAATCAAACCTTCTTCTGATCTCTCCTCTTCTCTCCCAATTTCTCTCTCAAACTCCATCTCCACCTCTGTTCAATCCTTCCAGAACC TTCTAGAACCGAATCCACCTAACCTCAGAAGCCCTTCCAATTCTCCTCTCAACAAAACTCTCCGCCGCTCCTCCCGCCGCTCTCAAACCGGTTCCGAAAC CAAACCCGAAACTCAACACCGTGTTCCGAATGTGGAAAATGAAAAGCTCAAACTCCTCGAGCGTCTCCAAATTCTCGCTCATATTGTGTCGCTGTGTCTT TCGCATCCTAAGAAAGCTTTCTCGCATGAGGATTTGCTTCCTGGTGTGCAGTTGCTGCATGATAATTTAATCATGTTCGAGTCGGATTCGGTTTTATCTT CGTCGATTGAATGTTTGTGTGAAGAATGGTGGAAGGAGAATTTGCAAGGCCGGGAATCGTTGATTTCACAGGCTCTGCCTTTTCTGCTATCGAGATCGTT GACTTTGAAGAAGAAGGTAGATGTGCACAGAGTCTACATGCTTCGAGAGGCGTTCAGTCTGTTTGATTTCGATGACGAGAGCATTGAAGATTTGAAGCTA TTGTTGGTTCGGTGCGTGATTTCGCCATTATATTTAAAAACAGAAGATGGGAGGAAGTTCCTCTCCTTTCTGTTTGGGCTAAGTGATCAGCTTGGGAAGG AGTTACTGGCAATGATTCGTTCACAGATACCATTCGGAAGGAAATCTATGCTGGAGGCTTATGGAGATGTCCTGTTTCGGGCATGGAAAGCCGCGGAAGG GGATTGCAGGGGTGAAATTGAGAATGGATTTTTGCAGGATATGATTGAGGCTGCAATTCATGCCAGTTCAGGAGCTTTTGCTTCATATATTAGAAGGGTT ATAGGAGCCTTCGTTAACCAGAGAACCATTGATGGGGTTGAGAAACTTCTTTATCGACTTTCTGAACCTGTCATATTTAGGTCACTTCAGGTTGCAAACT CAAATGTTCGTCAGAATGCTTTGCATCTATTTTTGGACATATTCCCTCTAGAAGATCCCAATGCCACAAAAGAAGAGAAAGATACATTGCTTGATAAGCA GTTCTTTTTATTAGAAAAGTTACTTATGGATGATTGTCCAGAAGTGAGGACAATTGCTGTTGAGGGTTCTTGCCGAGTCCTTCATCTATTTTGGGAAATA ATCCCTTCACCAACCATAACAAAGATAATTAAAAAAATATTTGATCACATGTCTCATGATGTATGCAGTGAGGTCAGGCTTTCTGTGTTGAATGGCCTCA TTTATTTGCTTGGCAATCCCCACTCTCATGAAATCCTTAAAGTGCTCTTGCCAAGACTGCAACATCTTATGCTGGACAATACCCTAACAGTACGAGTTGC TGCAGCAGATCTCTTAATTAATCTAAAGGATATCAGAAATTTTCAATTCAACAAGGTGGTTGAGCTAGACGTGTTATTGTCTGTGCTTGCTAGTGATCAA CCTTCTGTAGCTCAGAGAATAACAAAATTGCTAATACCTTCCTACTTCCCTTCAAAAGTACCCATTAAGGAGGCATGTAATCGCTGCATTTCACTTGTGA AAAGGTCTCCAGTGGCTGGTGCAAAGTTTTGTAAGTTTGTCATCTTGGAAGGAGCATCTAAAACTCATCTGATGGAACTGGCGAAAGTACTTATGAGTTT GGTTTTGTCACCTGATAAGCTGGATTCAAATCAGATTGAGGGTTTTCTTGTTGCTGCTAGCTACCTTTGTGATAATTTAGTCAACGAAGTATGCTATAGA AATGCCCTCAAAGAATTATTTACTGAAGAAAAATTGAAAGGCTTACTCACTGTAGTATCCACAGGGCAAGCTCAATCATCTCTATTTAATATTGTTTCTG CTGTCTGTCCGGATGGTGTTGATGATTTACTTGAACAATGCATGGATGTTGTCACAAAAAGCATAGGTTTACCCGAAGATGTTGATAACCAATCTAAAAT GAGGTCTGCGCATAAGATGTTGCTGTCATTGGGTTGTCTTGATGATATGTTTGAAGCCTTAACAGCCCTCTTGCATAAGGCTGCCTATCGCTGTCATATT AAATTTGGCACCGAAATGCCATCACATGGTTTTTCTTCTGCTAAAAAGAATAAATCTAAAGCATCTGGAAAGTTTTCAACAAAATCGAAGGTTATAAACA GAAGGCAATCTTTTAAGGATGATTATTTAGTTGCTGTAGGGATAGCATGGCAAGTTAGAGAATTGCTTCTGCATGAGGATACCAGAAAAGCTATGTTGAG ATCTCCAGTTTTAGAAATGTCATTTTTTTCTCTTAAGATGATTTCTGAGGTCAGCATTGTGCATTGTGGGCAAGAGGAATATATGGACATTTATCCTGTT TTAGCATATCTGACCCTTGCTCTGCAAATGGCAAATGACAGTGATAGCACAGTTGGTATGCACAACAGTGATAAGAAGAGGAACAAAAATAAGATTGATT CTTGTACATCACTTTCAGAGACTGTCTTGGAGATTACAATAGAGCATGTGCTCAACTGTTTAGAAAAACTATTTGGAGCAGATGGTGTTAAAAAAAATGG GAAAGTTGATTCAGATAATTTGCCATCTTCAAGCAGAACTTTTCGAAATTCTGCTAAAAGGTGTAGGTTATCTCCTACAATTGAAAGCCAGCCGAGTACT ATTGGATCTGGGTACAATGAACCCGAACAAGTATCATGCAAGGTGAAGATGCTTGCTGCTGTTCTTAAGTTCACAGCTGACACGACTGCAGTGTATTTTG CTCCTCACAACCATGGATTATTCTTAAATTACACATCAAAATGTGTGCAATACATCATATCTTCATTGGATCAGCTATATCGTAATCAGATTCAGTTTAA GGAAGAGGATCTGAAAAACACATTCTATTGTGTGAAAAGCTCTTTCACCTATGCAACAAAAATGCTCAATATGATACTTTCAGATTCTAGTGATTCCTCC ACAAGTCCTCCAGAACCTTTTGCTCTTGTGAATGATTTACTTGATTTAATGATTTTAGTTGAGTCATACATGGGCTCAGGGTATGCATCACGTCTTTTAT CAGCAGCACAACCCTGGCTACCTGATTTGGCTCTAGCGTTAGGATCTGCAAGTATTCTAAAACGTAGTGAGAGTGGTAGGAAACATTCAATTGCATCTGA CCAACTAAAGTTACACTTTCCAAAGTGGCCCTTGATTGTAGCCAAGACTGAGCTATCCAAAGTAAATGAAGCTGAAGAAGATAATGGATCTTCTGAACAA GAGAAATTCTCTGAATTCAACAGACTTTTCGCAATGCTGATTGTATTACTGAAAAAGAATCCCAGTATAATGGATGCAGTTGGAGATATTTTCTTGGCTT CTTCACTTGTTGGGTTGGAAAGAAAAGACTTTGGACTGGCATTAGGACTCTTGCATTTCGTGCGTTTTAAGTTTAAACTAGATGACAAGGATTGGGGTGA CATGATGCTGTCTTCTCTGCAAGAAATCTATCCTAAGATAAAGAAGGAAATTACAGAAGAAAGCCAAGAAGATGAACTTGAGAAATTAACATCTGCAAAG GAGTTGATTGAACCTCTTTGGATGTATCATTTATATGAAACTGGAAGGGTCTCCATGACTGATGACTAGAGAAGTAGACTTGTTTTCCTTTTTGCTCCCT TTGTAACAATTTGAGAGCATAATTAATGAAGAATTGAAGACCTTTACATGTCTGATGTAAATACTTTTCTGCCATTTCAGTGCAACTGAAGTGGCAACAT AAAAGGACAATTCTTGCCACAATGTGGTATTCTTTTGAATTTTACAGATTTTTGCTACTGTTCAATCTCAATAAGGAAATATTGCAGTTTACCATCTCCC
• Tissue: pods
• Gene name: LI_gene_137649;
• Additional information: details;

Expression of Ll_transcript_478204

FPKM

• PAB: 0
• PNAB: 2.9
• PS1: 1.7
• PS2: 0.8
• PS3: 1.1
• PW1: 0.8
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478204

• Blastp: Condensin-2 complex subunit G2 from Xenopus with 36.61% of identity
• Blastx: Condensin-2 complex subunit G2 from Xenopus with 36.61% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (446284)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421022.1)
• Pfam: Condensin II non structural maintenance of chromosomes subunit (PF12422.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;