Ll_transcript_478090

• Id Trinity: TRINITY_DN44414_c0_g1_i3
• Name Transcript: Ll_transcript_478090
• Sequence: CTAGAGTCAAAATAGGAGAGATTCAGACACATTTCTCTCCATCATTCAGAATCTCATTCAAATTCCAAAGTTGACATAAAATTTGTTTGTGGATAAGTTG AAGCAAAATCCGTGACGTATTGTAATTGTAAGGAACCCGTCACTATCAGTAGTTGTTATTCCATTATTCCATTATTAAATCTACCGATTCCTTTATGTTT CGCTTCAATACCAACCAATTTCGCTAAAACCCTAATGGCTTCGTCTTTCACCCTTTCCTCCTCCTCCTTTTCTTCTGCATTTCCTCTCTCCCACTTTCGG GTATGCAAAAACTTCAAATTGTTTAGTGGATTGCACAGAATAAATTCAACTATTACAAATGGGCATGCGCCGGATTTGGCATCTGTCCGAATGAAATCTA AATTTGCCTCGAGTGATGGTAGAATTAAAGCTACATTGGCCTCTGGAGGAGACCTACGAGGTATTGAATCGGTTGGAACTGAGGTACAACCTGATGCAAT AGCATTTGCAACACTGGGAGCTGACACGGCACTAGCTAGCAACGCTTTTGCCGATGACAGCGATGAATTTGATTTGGACAGACCTACAGATGGTTTTGCT TCCATTCCGGAGGCCATCAAAGACGTCCAGAATGGAAAGATGGTAGTGGTGGTAGATGATGAGGACAGAGAAAATGAAGGAGACTTAATAATGGCAGCAG AGTTGGCAACACCTGAGGCAATGGCTTTTATTGTGAGGCATGGAACCGGGATTGTTTGTATAAGCATGAAAGAGGAAGATCTGGAGAGACTGGAACTTCC TTTGATGGTAAACAGTCGGGATAATGATGAGAAACTCCGTACAGCGTTCACTGTGACAGTGGATGCTAAATATGGTACCACAACAGGGGTGTCAGCTCAT GATAGAGCAACAACAGTTTTAGCCCTTGCATCCAAAGATTCAAAGCCAAGTGATTTCAACCGGCCAGGCCATATTTTCCCCTTAAAATACAAGGAAGGTG GTGTCTTGAAGAGAGCCGGACATACAGAAGCTTCTGCTGATCTTGCCATACTTGCTGGTTTGAATCCAGTGGCAGTTCTGTGTGAGATTGTGGATGACGA TGGTTCCATGGCTAGATTACCTAAACTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTGTATCCATTGCTGACTTAATAAGGTATAGAAGAAAGAGA GATAAGCTAGTAGAACGTGCTGGTACTGCACTGATACCAACAATGTGGGGGCCATTCACAGCTAACTGCTATAGGTCACTTATAGATGGGATTGAGCATA TTGCAATGGTTAAGGGTATCATTGGAGATGGACAAGATGTTCTTGTGAGGGTACATTCAGAGTGTCTCACAGGAGACATATTTGGATCTGCCAGATGTGA CTGTGGGAATCAGCTTGCACTTGCAATGCAACAGATTGAGGCTGCTGGTAGAGGTGTATTGGTATATCTCCGTGGACATGAAGGAAGGGGTATCGGACTG GGCCATAAGCTTCGTGCTTATAACCTACAGGATGACGGACGGGACACCGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCAAGGGAGTATGGAA TTGGTGCACAGATATTAAGGGACTTAGGTGTTCGATCTATGAAGCTGATGACAAACAATCCGACAAAATATATTGGGCTCAAAGGTTATGGGTTGACAAT TTCTGGTAGGATCCCATTGGTAACACTTATCACCAAGGAGAATGAGAGATACCTGGAGACCAAACGTGTCAAAATGGGTCACATGTATGGCTTGGAATTT AACAACCAACTGAGCTATGATGACAGTGGAAATGGTAAAGCAAGTAGTGGTGATGATTCTAATGCAGTTACTGGCATATAAACTTGCCTTTTTCCCACCA GATACTCAATTTTATGTCACAGAAAAGAGGAAGGGAAATGCAGATTTCGATACTGCAAATGGATATAAGAAGAGAAAAAATCGTGATCCTACACACAATT TAAATTTTCTAATTCATATGCCTTATTTTTCTTCAGGCGCTCTGCTAAATTAGGCTTTCTCAAACATTTTTTCTTGCTCTGAAACTTTATCTAGTACTCC TTATCAAATATAAGCAAATTTTGAGTATTTCAATGTTGTCGAATATAAGGACTATGTAGTTTTGTGCTAAAATTTTCTAGTTACACTTTTATTTTATTTT AATGTTTAGTCCTTTTGGTTTTCAAGTGACTTTTCTCATGTAATAATTGCGCAATAGATATTAACGGCAGATAATTTAGTAAAAAA
• Tissue: pods
• Gene name: LI_gene_137657;
• Additional information: details;

Expression of Ll_transcript_478090

FPKM

• PAB: 21.8
• PNAB: 32.2
• PS1: 33.5
• PS2: 22
• PS3: 26.1
• PW1: 27.8
• PW2: 24.9
• PW3: 30.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478090

• Blastp: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic from Arabidopsis with 73.92% of identity
• Blastx: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic from Arabidopsis with 73.35% of identity
• Eggnog: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity)(COG0108)
• Kegg: Link to kegg annotations (AT5G64300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445549.1)
• Pfam: 3,4-dihydroxy-2-butanone 4-phosphate synthase (PF00926.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;