| Id Trinity | TRINITY_DN44414_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_478091 |
| Sequence | CTAGAGTCAAAATAGGAGAGATTCAGACACATTTCTCTCCATCATTCAGAATCTCATTCAAATTCCAAAGTTGACATAAAATTTGTTTGTGGATAAGTTG AAGCAAAATCCGTGACGTATTGTAATTGTAAGGAACCCGTCACTATCAGTAGTTGTTATTCCATTATTCCATTATTAAATCTACCGATTCCTTTATGTTT CGCTTCAATACCAACCAATTTCGCTAAAACCCTAATGGCTTCGTCTTTCACCCTTTCCTCCTCCTCCTTTTCTTCTGCATTTCCTCTCTCCCACTTTCGG GTATGCAAAAACTTCAAATTGTTTAGTGGATTGCACAGAATAAATTCAACTATTACAAATGGGCATGCGCCGGATTTGGCATCTGTCCGAATGAAATCTA AATTTGCCTCGAGTGATGGTAGAATTAAAGCTACATTGGCCTCTGGAGGAGACCTACGAGGTATTGAATCGGTTGGAACTGAGGTACAACCTGATGCAAT AGCATTTGCAACACTGGGAGCTGACACGGCACTAGCTAGCAACGCTTTTGCCGATGACAGCGATGAATTTGATTTGGACAGACCTACAGATGGTTTTGCT TCCATTCCGGAGGCCATCAAAGACGTCCAGAATGGAAAGATGGTAGTGGTGGTAGATGATGAGGACAGAGAAAATGAAGGAGACTTAATAATGGCAGCAG AGTTGGCAACACCTGAGGCAATGGCTTTTATTGTGAGGCATGGAACCGGGATTGTTTGTATAAGCATGAAAGAGGAAGATCTGGAGAGACTGGAACTTCC TTTGATGGTAAACAGTCGGGATAATGATGAGAAACTCCGTACAGCGTTCACTGTGACAGTGGATGCTAAATATGGTACCACAACAGGGGTGTCAGCTCAT GATAGAGCAACAACAGTTTTAGCCCTTGCATCCAAAGATTCAAAGCCAAGTGATTTCAACCGGCCAGGCCATATTTTCCCCTTAAAATACAAGGAAGGTG GTGTCTTGAAGAGAGCCGGACATACAGAAGCTTCTGCTGATCTTGCCATACTTGCTGGTTTGAATCCAGTGGCAGTTCTGTGTGAGATTGTGGATGACGA TGGTTCCATGGCTAGATTACCTAAACTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTGTATCCATTGCTGACTTAATAAGGTATGTGGTTGCATTT CATGGAAGATATAATAGATTTTGTGATATGAATATTTATAATCTTTTGGCAAAACTACTATTTCCGTCCTTTAACTTAATTGTTTTTCTTATTTTGGCCC CTTAACTTTTTTTGGCTGATTTTGGTTCCCCGGGTTTATTTCTAGTGGCACCCTTGGTCCTAATGTTAGTTTTTAGCATATTCCATTATAATATTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_137657; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478091
| Blastp | Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic from Arabidopsis with 76.45% of identity |
|---|---|
| Blastx | Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic from Arabidopsis with 76.45% of identity |
| Eggnog | Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity)(COG0108) |
| Kegg | Link to kegg annotations (AT2G22450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445549.1) |
| Pfam | 3,4-dihydroxy-2-butanone 4-phosphate synthase (PF00926.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |