Ll_transcript_478093

• Id Trinity: TRINITY_DN44414_c0_g1_i6
• Name Transcript: Ll_transcript_478093
• Sequence: CTAGAGTCAAAATAGGAGAGATTCAGACACATTTCTCTCCATCATTCAGAATCTCATTCAAATTCCAAAGTTGACATAAAATTTGTTTGTGGATAAGTTG AAGCAAAATCCGTGACGTATTGTAATTGGTATGCAAAAACTTCAAATTGTTTAGTGGATTGCACAGAATAAATTCAACTATTACAAATGGGCATGCGCCG GATTTGGCATCTGTCCGAATGAAATCTAAATTTGCCTCGAGTGATGGTAGAATTAAAGCTACATTGGCCTCTGGAGGAGACCTACGAGGTATTGAATCGG TTGGAACTGAGGTACAACCTGATGCAATAGCATTTGCAACACTGGGAGCTGACACGGCACTAGCTAGCAACGCTTTTGCCGATGACAGCGATGAATTTGA TTTGGACAGACCTACAGATGGTTTTGCTTCCATTCCGGAGGCCATCAAAGACGTCCAGAATGGAAAGATGGTAGTGGTGGTAGATGATGAGGACAGAGAA AATGAAGGAGACTTAATAATGGCAGCAGAGTTGGCAACACCTGAGGCAATGGCTTTTATTGTGAGGCATGGAACCGGGATTGTTTGTATAAGCATGAAAG AGGAAGATCTGGAGAGACTGGAACTTCCTTTGATGGTAAACAGTCGGGATAATGATGAGAAACTCCGTACAGCGTTCACTGTGACAGTGGATGCTAAATA TGGTACCACAACAGGGGTGTCAGCTCATGATAGAGCAACAACAGTTTTAGCCCTTGCATCCAAAGATTCAAAGCCAAGTGATTTCAACCGGCCAGGCCAT ATTTTCCCCTTAAAATACAAGGAAGGTGGTGTCTTGAAGAGAGCCGGACATACAGAAGCTTCTGCTGATCTTGCCATACTTGCTGGTTTGAATCCAGTGG CAGTTCTGTGTGAGATTGTGGATGACGATGGTTCCATGGCTAGATTACCTAAACTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTGTATCCATTGC TGACTTAATAAGGTATAGAAGAAAGAGAGATAAGCTAGTAGAACGTGCTGGTACTGCACTGATACCAACAATGTGGGGGCCATTCACAGCTAACTGCTAT AGGTCACTTATAGATGGGATTGAGCATATTGCAATGGTTAAGGTGATCAGTGCCTGTGTTTATCTTGAATTATATATCTGAAGTAATGTTGTGTGAACAT TCCTCATAGTTGAACTTGAACTGAAGTGTCTTCACTAAGTAGACAATAAAAATGTGAGCATGGAAAGCATACACCTGTATGGAAAGCATACACATAGGAT GAAAAGTCTGTGTGTGTGTGTATGTGTTTTTTTAAAAAGGAAGCTGTTCCTGAGTTACATCCATGCTAACCTTGTAAAAAGTTGAAGTATATTTTTTGTA TTTTTATCTTTTCAGCCTGCCATGGGGTATAGCGAAATTCATTATGTCCAGAATAAGTTACAAACTAGCAACGTGCAAATGAATAAATAGTTTGGCTTAG TCATGAGCCTTTCTAGTGAGATGCCGAGGAACTTTGAATAGATAACAGAAGGTACAACTATTAGCCTAAACCCTAGAGGATGCCTTTAGATATCAAAAAT CTTGTAAACTGTGTGAAGAGTGCAACACAAAAAACTTAAAATACTGGCTTGTTCTTGAGATGACTTGAAATTCTGCAGAGTGGTCCAAGTGCATAGTATA ACTCTGATCCAAAACTCCCTGTGCTTCCACAAAATAAACATGAGTCAGAACTAGACCTGAGCAGGCAGATGAATATGAATGATTTTGTCGGAATGGAATT AGAAAAGGTTAAGGGCTTTTTCTATCCATCATCCTTAAATAGGATCCATCAACTGGCCAACTGTAAGTTGAGGCCACCACAATGCCCCTGCAAGAGATTG GAGGAGGTCTTGGGCAATTACAGGGATCCAGTTATATCTCTAGACTTGGATGGTGTTCATCTGGAAAATAAATCTCATTGATATAAATAGGATGTCAAGT TACTTATTATCTTTTTGCCAAACACTGTCACAAGGTTTTGCCTTCTGTAGGGATAGATTGACATTTACATTTTTTATCACTTTGCTTTCAGGGTTTTTGT TAGTAACTAGTAAGCTCGCATAAGCCTGAAGTATTTGCAAAATTGTAAAGATTTTCCAATTTTCTTGAACTTATCCATTTTAGTGTTTTAGATTGCTTGA TTAAACAGTCAATTTCTTTCCTCTATATTTGTGGTTTTTATTGTTTCTTGTGTGAAGGGTATCATTGGAGATGGACAAGATGTTCTTGTGAGGGTACATT CAGAGTGTCTCACAGGAGACATATTTGGATCTGCCAGATGTGACTGTGGGAATCAGCTTGCACTTGCAATGCAACAGATTGAGGCTGCTGGTAGAGGTGT ATTGGTATATCTCCGTGGACATGAAGGAAGGGGTATCGGACTGGGCCATAAGCTTCGTGCTTATAACCTACAGGATGACGGACGGGACACCGTAGAAGCC AATGAGGAGTTGGGATTGCCTGTTGACTCAAGGGAGTATGGAATTGGTGCACAGATATTAAGGGACTTAGGTGTTCGATCTATGAAGCTGATGACAAACA ATCCGACAAAATATATTGGGCTCAAAGGTTATGGGTTGACAATTTCTGGTAGGATCCCATTGGTAACACTTATCACCAAGGAGAATGAGAGATACCTGGA GACCAAACGTGTCAAAATGGGTCACATGTATGGCTTGGAATTTAACAACCAACTGAGCTATGATGACAGTGGAAATGGTAAAGCAAGTAGTGGTGATGAT TCTAATGCAGTTACTGGCATATAAACTTGCCTTTTTCCCACCAGATACTCAATTTTATGTCACAGAAAAGAGGAAGGGAAATGCAGATTTCGATACTGCA AATGGATATAAGAAGAGAAAAAATCGTGATCCTACACACAATTTAAATTTTCTAATTCATATGCCTTATTTTTCTTCAGGCGCTCTGCTAAATTAGGCTT TCTCAAACATTTTTTCTTGCTCTGAAACTTTATCTAGTACTCCTTATCAAATATAAGCAAATTTTGAGTATTTCAATGTTGTCGAATATAAGGACTATGT AGTTTTGTGCTAAAATTTTCTAGTTACACTTTTATTTTATTTTAATGTTTAGTCCTTTTGGTTTTCAAGTGACTTTTCTCATGTAATAATTGCGCAATAG ATATTAACGGCAGATAATTTAGTAAAAAA
• Tissue: pods
• Gene name: LI_gene_137657;
• Additional information: details;

Expression of Ll_transcript_478093

FPKM

• PAB: 16
• PNAB: 7.4
• PS1: 11.1
• PS2: 1.6
• PS3: 8.4
• PW1: 6.7
• PW2: 4.2
• PW3: 10.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478093

• Blastp: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic from Arabidopsis with 78.06% of identity
• Blastx: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic from Arabidopsis with 66.67% of identity
• Eggnog: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity)(COG0108)
• Kegg: Link to kegg annotations (AT5G64300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445549.1)
• Pfam: 3,4-dihydroxy-2-butanone 4-phosphate synthase (PF00926.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;