Ll_transcript_478190

• Id Trinity: TRINITY_DN44433_c0_g1_i1
• Name Transcript: Ll_transcript_478190
• Sequence: ACTTAAGGGAAATCAAACCTTACTTCCATAATTGGTGCCCTTTAAGTCAATAATAGCCCCGAATTTGAAAAAAAAATTTGGCGGGAAAGTAGAACACTAT GAAACAAAGGCATCAAAACCCACACCAATATTCTTCTTCTTCTTCTCCAATGGAAGAACCGAATGAAAAGTGTTGGAGGCAACAAGTAGATGAGAATCTT CACCGTCTCCACTCTCTCCAGTTCGGCGCTGAAATCTCTCTCGATAACAACGATTTCCATTCCGCTCATATCTTCTCCCTCCGCCTCCTCGGCTTTCTCG ATTCCCACACCGTCTCCGCCGTCGATGAAGCCTTCGTTCATCCTATTCGCCGTGAAGTCCTCGCCAAGGTGCACTCTATTCGTAGATCTCTCGTTCCTGA TTCCGATCGGTATGCTTTTGAACAAGCAAAGAAAACTCCTGGACTTGTTTTTGGCGCAACTGGAGATATTGATATTGACATTGACAAGATTCGCAAGTCG AAATTCTTTCGAGCTCTTAATGAAAATGATGACAATCAATTGGGTGATCAACAGGGGAAGCAACACAAGACATGTGGCAAGGAATCAAAGGAAAGGGTGC AAGCAAAATTGACAACCATATATGAGAAAAGTACCGTCAAAACTAACAGCTCTGAGGACTGCATGGTTGTTGAAAGGCCTCAATCAAGTACCGGCCATAC AAAGGGTCGTGCTTTCTTTTCTTTTGATGAGGAAGAAAGAGCCTTTGCAAACACTTTTGGGAAAAAGCGTGCACACTTAGAAATTCATAGTCCTAAAGTT GGTTATGCAAATTCACCTTCAAGCAAGGAGGAAGTTGATTCTGATGGCCATGGCAATGGGTTTGTTACTGCTAGAGCCAAATTGGAAATGGAAGCAAGGC AGAAGCGCGGAGGTGTTGGTTCACCAAGTGCAGCAGTCTCACCACAATGCGATAACAATCCTGCCAATAGGTTATATGGTGGGCGATCATATGGTGTTTC ACGACGTGGTGTCCGTGGTAATTTTGTTCCTCCTATTAAATCCAATGGGAACAATGTTGGAAATATGACTTCACGAATTGGTGGAAAGAGTGATGATTCT TTAGAGGACTCTACAAAGAGATGTATGGAAATGCTGTATGGGCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATTGAACATA TTAGTAATGAAATTATGGATCGAGATCCCAATGTACGGTGGGATGACATTGCCGGATTGGATCATGCTAAGAAATGTGTCACTGAAATGGTCATATGGCC TCTGCTACGTCCTGACATATTTAAGGGTTGTCGTTCCCCAGGGAAGGGTCTACTTCTATTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCC ATAGCAGGGGAAGCAAAGGCAACTTTCTTTTACATATCCGCAAGTTCGTTGACAAGCAAGTGGATTGGAGAAGGAGAAAAGCTAGTAAGAGCTCTTTTCG GAGTTGCTAGTTGCCGTCAACCAGCAGTAATTTTTGTTGATGAGATAGATTCGCTTCTGTCTCAGCGTAAGTCAGAGGGTGAGCATGAATCAAGTAGAAG GCTAAAGACACAATTTCTAATTGAAATGGAAGGCTTTGACAGTGGCAACGAACAAATTTTGCTTATAGGGGCAACGAATCGTCCTCAAGAACTTGATGAA GCAGCACGAAGGAGACTTACTAAAAGACTTTATATCCCTCTACCCTCTTCAGAGGCAAGAGCTTGGATTGCACGTAACCTTCTAGAGAAAGATGGGTTAT TCAAGCTATCAAACGAGGAAATAGATATCATCTGCAACCTAACTGAAGGTTATTCAGGATCTGACATGAAGAACTTAGTGAAGGATGCTTCTATGGGTCC CCTAAGAGAAGCTTTAAGACAAGGCATAGAAATTACAAAGTTGAAAAAAGAGGATATGCGACCAGTAACCCTTAAGGACTTTGAAAATGCCCTACAAGAG GTGAGACCCTCTGTTTCCCCACATGAACTTGGTACCTATGATGAATGGAACAAGCAATTTGGAAGCCTTTCACTGTAGACTCTCTCTTATCATTTCATCA AGACAAAAAACATAGAAACAACTAAATTCTAAAGTTGCTAGTAACATTAATATAAATCAAGAAGAAAATTAAATGATTGCCACAAGCTGATTTATAGTAC AATGATCATATTTAAATCAGCTTTGCTTAATTGGACAATTGCTTGTAAGGTAATGAATTGGATCAAGCATGTGCATATTTGAAAGAAATTAATGTCACAA ACATAGCACGTTTTTTGCAGGAATATTATTTCTCAATGATGATGAACATGTCCAACGACCAAAGTTAG
• Tissue: pods
• Gene name: LI_gene_137694;
• Additional information: details;

Expression of Ll_transcript_478190

FPKM

• PAB: 0.1
• PNAB: 5.2
• PS1: 6.8
• PS2: 2.2
• PS3: 3.7
• PW1: 2.9
• PW2: 1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478190

• Blastp: ATPase family AAA domain-containing protein FIGL1 from Arabidopsis with 66.62% of identity
• Blastx: ATPase family AAA domain-containing protein FIGL1 from Arabidopsis with 65.85% of identity
• Eggnog: Aaa atpase(COG0464)
• Kegg: Link to kegg annotations (AT3G27120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438661.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;