| Id Trinity | TRINITY_DN44433_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_478191 |
| Sequence | ACTTAAGGGAAATCAAACCTTACTTCCATAATTGGTGCCCTTTAAGTCAATAATAGCCCCGAATTTGAAAAAAAAATTTGGCGGGAAAGTAGAACACTAT GAAACAAAGGCATCAAAACCCACACCAATATTCTTCTTCTTCTTCTCCAATGGAAGAACCGAATGAAAAGTGTTGGAGGCAACAAGTAGATGAGAATCTT CACCGTCTCCACTCTCTCCAGTTCGGCGCTGAAATCTCTCTCGATAACAACGATTTCCATTCCGCTCATATCTTCTCCCTCCGCCTCCTCGGCTTTCTCG ATTCCCACACCGTCTCCGCCGTCGATGAAGCCTTCGTTCATCCTATTCGCCGTGAAGTCCTCGCCAAGGTGCACTCTATTCGTAGATCTCTCGTTCCTGA TTCCGATCGGTATGCTTTTGAACAAGCAAAGAAAACTCCTGGACTTGTTTTTGGCGCAACTGGAGATATTGATATTGACATTGACAAGATTCGCAAGTCG AAATTCTTTCGAGCTCTTAATGAAAATGATGACAATCAATTGGGTGATCAACAGGGGAAGCAACACAAGACATGTGGCAAGGAATCAAAGGAAAGGGTGC AAGCAAAATTGACAACCATATATGAGAAAAGTACCGTCAAAACTAACAGCTCTGAGGACTGCATGGTTGTTGAAAGGCCTCAATCAAGTACCGGCCATAC AAAGGGTCGTGCTTTCTTTTCTTTTGATGAGGAAGAAAGAGCCTTTGCAAACACTTTTGGGAAAAAGCGTGCACACTTAGAAATTCATAGTCCTAAAGTT GGTTATGCAAATTCACCTTCAAGCAAGGAGGAAGTTGATTCTGATGGCCATGGCAATGGGTTTGTTACTGCTAGAGCCAAATTGGAAATGGAAGCAAGGC AGAAGCGCGGAGGTGTTGGTTCACCAAGTGCAGCAGTCTCACCACAATGCGATAACAATCCTGCCAATAGGTTATATGGTGGGCGATCATATGGTGTTTC ACGACGTGGTGTCCGTGGTAATTTTGTTCCTCCTATTAAATCCAATGGGAACAATGTTGGAAATATGACTTCACGAATTGGTGGAAAGAGTGATGATTCT TTAGAGGACTCTACAAAGAGATGTATGGAAATGCTGTATGGGCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATTGAACATA TTAGTAATGAAATTATGGATCGAGATCCCAATGTACGGTGGGATGACATTGCCGGATTGGATCATGCTAAGAAATGTGTCACTGAAATGGTCATATGGCC TCTGCTACGTCCTGACATATTTAAGGGTTGTCGTTCCCCAGGGAAGGGTCTACTTCTATTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCC ATAGCAGGGGAAGCAAAGGCAACTTTCTTTTACATATCCGCAAGTTCGTTGACAAGCAAGTGGATTGGAGAAGGAGAAAAGCTAGTAAGAGCTCTTTTCG GAGTTGCTAGTTGCCGTCAACCAGCAGTAATTTTTGTTGATGAGATAGATTCGCTTCTGTCTCAGCGTAAGTCAGAGGGTGAGCATGAATCAAGTAGAAG GCTAAAGACACAATTTCTAATTGAAATGGAAGGCTTTGACAGTGGCAACGAACAAATTTTGCTTATAGGGGCAACGAATCGTCCTCAAGAACTTGATGAA GCAGCACGAAGGAGACTTACTAAAAGACTTTATATCCCTCTACCCTCTTCAGAGGCAAGAGCTTGGATTGCACGTAACCTTCTAGAGAAAGATGGGTTAT TCAAGCTATCAAACGAGGAAATAGATATCATCTGCAACCTAACTGAAGGTATCAAATATTTTTCCTAGTTGAACTATTTTTGCCTATTACTTTTGTTAAA TAGTTAAAAGGGACATAGTGATGGGCAATAAAATATTAAAATGAGAATAAATAGTAGAGATATGAAAATATTGAGCTTAGGAATGAATGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_137694; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478191
| Blastp | ATPase family AAA domain-containing protein FIGL1 from Arabidopsis with 65.23% of identity |
|---|---|
| Blastx | ATPase family AAA domain-containing protein FIGL1 from Arabidopsis with 64.37% of identity |
| Eggnog | Aaa atpase(COG0464) |
| Kegg | Link to kegg annotations (AT3G27120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438661.1) |
| Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |